FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAACCTGCTGTTCCTGTTCAGCATCGGTATCGATAAGACCAAAGCACTGA320.0No Hit
CCACTCGTTCCGCACGGCACTTGCAGCGCTCAGGTTGTGCGACCCGCCCA320.0No Hit
CCACGAGCTCCTTTAGTGCGGTCTCTCTTCTCTGCTCACTACTCCTGGGC213.333333333333334No Hit
GTTTTTCACCCCTTCTGTACCCCGGTCCGTAGCCATGTCCCACGCCCTTC16.666666666666667No Hit
GCGGCGCGCTGCGCGAAGGCGGGCTCGACGATCTCCTCGATCGCCTGCTG16.666666666666667No Hit
CATCACCGCAAGGCCCCAGGTGAAGCGAACCCACGCCCCGTATTTCGGGT16.666666666666667No Hit
TTACTGGATCACCGTTTGACCATTTAGCATCTTTACGTAATTTAACGGTA16.666666666666667No Hit
TCAGAAGGGTTTGACGATCACCATGATGACGATGACGATCATCGCCAGCG16.666666666666667No Hit
TATTCAGCCTGCGAACCAGATTTGGTGCACTCCACTCCTTTCCTTTTGGA16.666666666666667No Hit
CCGGGTCGACTTCTACTCCAGCCACGAGGCGCTGCTGCTCGAGTACGAGC16.666666666666667No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)