FastQCFastQC Report
Tue 10 May 2022
EGAF00003659312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27533
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT600.2179203138052519No Hit
GTACATGGGAGTGCATTAAAAAAGAAGCCACTGAAGACAGGCTTAAGCAT560.20339229288490177No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT460.16707224058402642No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG440.15980823012385137No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA370.13438419351323866No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC330.11985617259288853No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA320.116224167362801No Hit
GCATAGGGCCAGGGGAATCCATATTGAGGAGTGCCTCAGCAGCCTCAATA320.116224167362801No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT310.11259216213271347No Hit
CGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCT310.11259216213271347No Hit
GTACATGGGAGATGCCATTACTTCTGCTTTCGTATCTCCTCAGGCAAAAG310.11259216213271347No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT310.11259216213271347No Hit
GTACATGGGAGAGCCAGCTGTGTACCACAGAGACTGAGAGTGGTGAGTGG310.11259216213271347No Hit
GTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTT300.10896015690262595No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG290.10532815167253841No Hit
ATATTGAGGAGTGCCTCAGCAGCCTCAATAGTTTCAATTGTTTCATCCCC290.10532815167253841No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)