FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62
Sequences flagged as poor quality0
Sequence length140
%GC65

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCGCGGCGTGCTGCACCGCCTCCTTCGCGGTGGCCACCTCGGCGCGC58.064516129032258No Hit
CAGCTACTCTCTCTCGTTGAGCTAGGAGTCTGCGCGGCAGAAGTATTTTA23.225806451612903No Hit
GGCTCAGCGAGGCTGACATCGATGGCACCGCACGCGAGATCCGCCGCGCG23.225806451612903No Hit
TTTTTGGATGCTTATCTGAAGTTTGCACCAGCTCCACAAGCACGGATGAC23.225806451612903No Hit
CACCTGGATGACGCGATCAACGTCACCGACGGCGTGCTGGAGCTGCTGGC23.225806451612903No Hit
GTCACACACCCACCGCGCAAGCGTGGTTCCACGCCGTGGACCACGGCGTT23.225806451612903No Hit
GTCTTCGGCTACCAGCTCACCGGCTACTACGACCTCGTCGACGGGCTCAG23.225806451612903No Hit
CTCCTGACGGTGCCGCGACCATTTCGCCAGCACCTTGTGTGCCGGGGTAG23.225806451612903No Hit
GTGCCGAACCGCCGGACCAGGTGCTCGGTCGACACCGTGCTGCCGATCTG23.225806451612903No Hit
ACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAA23.225806451612903No Hit
GCACCGCCGTGGTGCTGAAGGTCTCGGGCCCCGACTCGCCCCTGATCCGC11.6129032258064515No Hit
CGCCAGCGGCGCAGAGCTCGCCGGCCACGATGCCGTACTGGCCGTTCGCC11.6129032258064515No Hit
GGATCGATGCCGCCGACCTCGTGTCCCGGTAGGACCTCGGCGACGACCGC11.6129032258064515No Hit
AAATCCTTAACGGGACAATATTTGGCAGGGAAGAAATTCATTCCATTGCC11.6129032258064515No Hit
CGATGCTCGCCGGCGCCGTCACGGTGACCGCGTCCGTGTGGGCGTGGACC11.6129032258064515No Hit
CCGTCGCGCAGGCCCGACCAGCGGGCGGAGAAGATCCCCGGCGAGCCACC11.6129032258064515No Hit
TCATTAATGATGAAGCTCTTATTTACCTGAAAGCGCCGATTAAGCGTGTA11.6129032258064515No Hit
GTACTCGGGGTCCGAGGTGTGCAGCTCACGGGACCAGTCCACGGCGATGC11.6129032258064515No Hit
GCACCCAGGCACCTCACTCGCACCGCAGGCGGTAGCCGATCCCGCGTACC11.6129032258064515No Hit
GGTCTATGTCCATCGATAAGGAACTTGAAGGTTTTTCTGAATTTGCGGAA11.6129032258064515No Hit
GTCCAGTTCTGGAACGGGCGCTCGGTGAAGTAGGTCGTGGGCAGAATGAG11.6129032258064515No Hit
TACGCGTCCGGCGGGCCGAAGACCCGCAGCGGCGACTCGCCGCTCTCCGC11.6129032258064515No Hit
GGTGTCGGGTTGTTACGGATAAGGATTTCCTGCTGGCCTAGCGTCCATAG11.6129032258064515No Hit
GCCGTGGACCGGGTGCTGCCACGCCAGGTTGCCGCGTAGCCGATGCCCGT11.6129032258064515No Hit
GGCCACGCCGGAGGAGGCGGCCGCGTACCCGTACACGGAGGTGGAGCGGG11.6129032258064515No Hit
GCCTGATTCCAATCCAGGATAAACCGAGTTTGAATGGCTTTGACAGCCGA11.6129032258064515No Hit
GGCTCCGGCCGCACCCCAGCCGGCCGCCGCGGCGCCGGCCCAGCCGGCCG11.6129032258064515No Hit
CGTTCCGGGTGCCCGAACCGCACGAGCTGCCCGGGCGGCTGCCGGGAGTG11.6129032258064515No Hit
CTGCCTCGGTCTCCTCGCCGCCGTGCCGGCCCTGCCCGCGGTGGCTCCCG11.6129032258064515No Hit
ATANTGAGATGCCGGTCTTATTCGCCTGTATATTTTATCATACNGCAGCA11.6129032258064515No Hit
CTTCGTAGACTTCCCAAGGCTCGGCGACGGCCACCGTCCAACCCGGGGCG11.6129032258064515No Hit
CGCCAGCGGCGCAGAGCTCGCCGGCCCCGATGCCGTACTGGCCGTTCGCC11.6129032258064515No Hit
ATGTTTGCCCGCTTTGCGGTAGCGGTACAGGAAGAAATGCTACAGGAGCT11.6129032258064515No Hit
GGGGCTGAGCACGTTCGATCTGTTCGGAACCGCCCCCGACGACGCCGGCC11.6129032258064515No Hit
GTCAGCACTTGTGCGGAATGATGCAATTTCTTCCGTTCCTCCTCCGGCAA11.6129032258064515No Hit
CCATCCTCTCGCGCGGCGCCGGGCCCCATTACCGCAGCGGCACCCAGAGT11.6129032258064515No Hit
GCCTTTGTACCCAACCGAAATTCTGGCGGAACGCTTCCTGCAGCAGGATA11.6129032258064515No Hit
CATCACCACCATCGAGCCCGGGCCGGACTATTTCGGTGCCGAACGGTTGT11.6129032258064515No Hit
GGGCTCACCTGCCGGCACTTCGGGGGCCGGGTCGGCGAGATCGGCGTGAT11.6129032258064515No Hit
CTTCTCCGTCGGCGTCGCGCTCGTGCTCACGCTGGCCACGATGGCCACCG11.6129032258064515No Hit
CCACCGGACCAGCGGGGTCCTCAAAGAGGCCAACGGCGCGAAAAAGCGCC11.6129032258064515No Hit
CGCGCAGCCGGCGCTGGTAGAGCGTGTACGCCTCGGCGAGCGCCCGCTCG11.6129032258064515No Hit
CCCGCACCATCTCCCTAAAAAGGGAAAAATCCTGCTCCGACCGAATCGTC11.6129032258064515No Hit
GAGAGTACCTGTGCAAATGTGTTTGCCAAAGGGAACCAGCAGGCGGTTGA11.6129032258064515No Hit
GAGCTTCGCATGGGCGCGTCGACAGGCACGCATGCGGGAGACGGTGCACC11.6129032258064515No Hit
AACTTGAACACCCCATTGTTGCAGTTGGGGCTGTTGTTCGTCGGGCTCCA11.6129032258064515No Hit
TCGGTGAGCAGCTGCGACACCGCCGCGGTGTTGCCCACCGCCGCGGCGGC11.6129032258064515No Hit
GGCTCCCGGTGGTCCCGAGCCGCAGGAGCCGACCAGCGGTCTGCTGCGCA11.6129032258064515No Hit
CACACCGTCACCGCCACGGTCGGCGGCCACTACACCGGTGCGACCAGCGC11.6129032258064515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)