FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62
Sequences flagged as poor quality0
Sequence length140
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGGCGGTCTACCGGGCGCTGCGGGACGTCGTGCTCGTCGACGACCTCG58.064516129032258No Hit
GCGCTGGGCGCTACCGGCGCGGTGACGGGAGCGGCGGTCGGCCTGGCCGG23.225806451612903No Hit
TCGCAGCACGGTGCGGATCGCGGCCAGCACGTCGTGGGGGCCGGTGAGCG23.225806451612903No Hit
TATCTCCGCTTACCGCTTCATTTACGGTGTTTCGATCATCAGCCATGAAT23.225806451612903No Hit
CCGATCAGGCCCTTGGCGGTGCGGCGGACCTGCTCCACAAAGCTGGTGAT23.225806451612903No Hit
ATGGGAGGCTTGGCAGCGGCAGCGCCTGTTGCCGGCCTTGGTCAACGCCC23.225806451612903No Hit
GCAGTGCTTTCATTTCAGCGTACAATCGCCACATTGCTGCACATCCGGTA23.225806451612903No Hit
CTTGACGACCTGCTGACCGGGGTTCAGCGCCTCGGAGACCTCGGCACCCA23.225806451612903No Hit
CGCCAAGACCATCAATCGCGCAACCCACGTCACCCGCGGATTCCGCCGCA23.225806451612903No Hit
GGCAAACCGATATTTAGCCTGGCTGGATATCTCGGGCGGCCGCGACCATG23.225806451612903No Hit
GTGGTGCTGCACGACCTGACCGAGTGGACTCCCCCCGAACTCGTGTACGG11.6129032258064515No Hit
GGTGATGCGATGCGTGCGGCAGAGCTGGGAGGTGATGCGGAAATGGCCGA11.6129032258064515No Hit
CCGGCGATCTGCTCGCTCTGCCGGGCCACCTCGGCGCTGGCGGTGAGATG11.6129032258064515No Hit
GATTTATGGAGGATCTCATTCACTAAAGTACTTTTCCCTGAACCGGAGAC11.6129032258064515No Hit
CTCATCATCATCATGGTGGCGACGCTGTTCTACACCCAGCTTCAGCTGAT11.6129032258064515No Hit
GCCCGGGTGGGCGTGGGCACCGCCGGCGGCGCCGAGGGCATGCTCGGCCG11.6129032258064515No Hit
GCCGGAGTACTGCAACGCCGATGGCACCAGGAAGCAGGCGTCGGCGGTGA11.6129032258064515No Hit
ATATTACATCATTCAAAGGGACGGCCTGGGTAAACGATTCATTGAAGCTT11.6129032258064515No Hit
CCGCTGAGCGGCTGGCCCGCGCCCGCGCGCTGCGGCTGCGCCGCCGCGAC11.6129032258064515No Hit
GCTTCACGCCGTGCCGGGCGAGGAACGAGTCCTTCGCCTGGGCCCGCAGC11.6129032258064515No Hit
GATGGTGGCTCGCGAGCTGGATCTCGACCCGAAGCGCTACCCGGCGCGGG11.6129032258064515No Hit
GGGCAACGCCTTCGCTGGCATCCAGGTCGCCTTCGCGGACGGCCTCTACG11.6129032258064515No Hit
GAGCGTGGGCGCGATACTGAGCGAGGAGCCGAAGCGGTGAACCACAACGC11.6129032258064515No Hit
CCACCTGGACGGACCGGCACACCGTCGAGGTGCACGTGGGGTCGCTGCGC11.6129032258064515No Hit
CTACAAGCAGGTCGAGGTAGCCCCGGTCACGGAGGTTGAGCACCAGATAG11.6129032258064515No Hit
CTTTTAGATAGAGTCGATAAAAATCCCACAAACGCTGTCCGCAGTCACGC11.6129032258064515No Hit
GTGCAGGGGGGCTACGCGGGCGTGACGGACGCGGCCCGCGTCACCGTTGC11.6129032258064515No Hit
GTTCAAGCAGGTCGAGGTAGCCCCGGTCACGGAGGTTGTGCACCAGATAG11.6129032258064515No Hit
GCTCCGGCACGGCCTCCGCGCCCGGCTGGGCCGCCCCGCCAGCCGTACCG11.6129032258064515No Hit
TCACCCCACCGGCTCACCAGACTGGCAGCGCCCGCCGGCTACCTCGCCAC11.6129032258064515No Hit
GGACCAGCATCGACGAGTGCCCGTCCTGCCCACGCAGACGCCTGACGGCT11.6129032258064515No Hit
ACTGGATGCAGCGCGGCTTCGACGTGCTGCATCCCATCGGCTGGGACTCC11.6129032258064515No Hit
CCCGTTTGACCCGCGCAATTCTGAACGATGAGAATTCGGTCTTGACCGTC11.6129032258064515No Hit
CCCTCTACGTAGCCTATTAGGTCTAGTGTATCCCCGCCTTTATCGCATGC11.6129032258064515No Hit
GCTATGTACATCGCATCGGTCGCACTGGACGGGCGGGTAGGACGGGAGTC11.6129032258064515No Hit
GGCCACGTGGGCACCTTCCACGCCGAGCGGGTGGACGGCGTCCCGTACGT11.6129032258064515No Hit
GTCCCAAATGTGCCAACCTGGCATTAGGCATTGCCTGCCAGCAGCCACGC11.6129032258064515No Hit
GCCGTCGGTGCGGGCAGCGCCGAGGCCCTCGCGCAGTGCGCGGGCGGTCG11.6129032258064515No Hit
CTTAACCACTCCCGCTGCCGGAGCTGTCAATTCCGCATTGACTTTATCCG11.6129032258064515No Hit
CGACTTCTACCTCGCCGTGTTCGAGGTGGACATGAGCGCGTTGACCTACG11.6129032258064515No Hit
CAGCGCGGCGATGGCGGCCTGCACCCCGTACGGGCCGGGTGGACCGCCGG11.6129032258064515No Hit
CTCCAGCAGATCCTCGGCGAGGCCGACCTCGACCTCGAGATCGTCTCGAT11.6129032258064515No Hit
GATTGTTCGTTGACGGACCTTGAATTACTTACTTTATCGGTTGTCATGAT11.6129032258064515No Hit
TNCNATAGCTTTTATATTGTGAGCGCCTGCATCAATACAGACAATATANC11.6129032258064515No Hit
AGTAGTTGATCTGCAGGTCGGCGGTGCCGAGGTAGTCGTCGCCGCGGCTG11.6129032258064515No Hit
CAGATCCGCACGGCGGCGAACGGCACCAGCGCGAGCAGGCTCACGAACAC11.6129032258064515No Hit
TTCCAAACTAGGCGCCGTCCGGGTCGCGGGGGTGACGCCAGCGTGAAGAT11.6129032258064515No Hit
GTCGTCGCGGCCGGGGCTGCCCCGGTCGGTCACCGTCGCCGTGAGCGTCA11.6129032258064515No Hit
CTTGGTGCTGGTGTCGACGAGGGTGCTGCCCGTCCTCTTATGCTTGCGCA11.6129032258064515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)