FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTAGGCATCCTGGTCACCCCAGCGCAGCTGGATCGGTATGCGAATCA212.5No Hit
CCAGTCGAGGGTCGCGCGGACAAGGATCGGCGTCTGGCCGGGGCTGAGGG16.25No Hit
CCCTGGAAGGCCACGGATCCCCTGGCCGGCACCAGACCGGTAATGGCGTC16.25No Hit
ATCTTGCGCAGGCTCGGCACGGCCAGTCGCAAGAATAAGCTTTACTACGC16.25No Hit
GTCGACCTGTTCCTGGTCGACTCCACCAACGCCGAGGTCCCCGGGTTCGT16.25No Hit
GACCAGTTCGCCAACAAGACCATCGGCGTGGCGCTGGGCTTCGCGCATAG16.25No Hit
CCCCGACATCGCCGCGTCCTGGCGCCGGGCAAGCCTGGCCGGTGTCGAGC16.25No Hit
CGCCGAAGCCCCGATTGACCTCACCGGAGCCAGGATCTCGGGAACAGAGA16.25No Hit
GGCTGGCCATGTCGGGCATCCTGCGCGCGTTCGTCGGCACGGACGCCGCC16.25No Hit
TCAAATGATAATTGCCCGTTGACCACTTCGGCCATGCTCACGCTCAAATT16.25No Hit
CGTACGCGATGATCGGCACGCACACGTTCCTCGGCCAGCAGACCGTCACC16.25No Hit
GTACCACTGAGCCGACCAGGGCGGGACATAGAGCTGATCGGTGATCCCGG16.25No Hit
ATCTCGTCGTCATCGGCACCGGCCCTGGCGGCTACGTCTGCGCCATCCGC16.25No Hit
TAGCGCGAGCCCATTTGCGGACATAGGCCGTCGATCCGGTGGGATCGCAC16.25No Hit
GGCTGGCCATGTCGGGCAACATGCTCGCTTTCGGCTGAACGGACGCCCCC16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)