FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGAGGACCATTATCTGCGCACCACCCGGCGGGCCCGCCAGGTGTTCGA212.5No Hit
GGCCAGGATGATCCGGGACGGGGCGCGGCGGACCAGGTCCGCGATCACCG16.25No Hit
GTGCCCGACGCCGTCGTGATCGACGAAGCCGTGGAGCTGGCGAAGACGCT16.25No Hit
ATCGTGTAGCTGGTGCCGATGCCGAACGTGCCCTGGCTGTCGACGTCCAT16.25No Hit
ACGAGAAGGTGTTGCTGGGGCGGAACTCGATCACGCCCATCACGCCGTCG16.25No Hit
GAAGAAATCCTCAAGCCCGACGACGAATATGTTCTCGTCGCCGATCAAGT16.25No Hit
CTCCGAGGCGTGGAGCAGCGCCTTCGACGGGATGCAGCCGATGTTGAGGC16.25No Hit
GCTGAAGTGCCGCAGGGACTCTGCGAAGTGCTCCGACCCGTGGATCACGA16.25No Hit
ACTATCTGGAGATCAAGAAGCTCCAGGGGGAGTTCGATGGGTTCGTGGCA16.25No Hit
GAGGAGAGGCTGCGGCTGATGTGGATCGGGCGCGGGCTCTGGTCGGATCT16.25No Hit
TGATGACGGCACCAAAGAACCACGCGCGAAAAAATCAAATGGCACAAGCG16.25No Hit
GCCGGATGTTTTCCGCGATGACACCGTCGCCACCGAAGAACAACCACTTA16.25No Hit
CGGGCTACACCGTCCGGGCCTATCCGCCCATGGCGCAGGCCGTCCGCGCT16.25No Hit
GTGCCCGACAACGGCATCCAAGACGCATAAAAACATCTGTCGAAGCCGCA16.25No Hit
GATGCGGCAGTTCGTGAACAGCACTTTGTCCCACACACTGTCGTAGACGA16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)