FastQCFastQC Report
Tue 10 May 2022
EGAF00003659666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5056
Sequences flagged as poor quality0
Sequence length140
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGAGGGTGGTGTCGAGCTGCGCCAGTTCGACCGCACCGATGCCGCCGA90.17800632911392406No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.17800632911392406No Hit
GCCATGGAGACGCGCGTCGCCGAGGGCGACTCGACCCGGCCCGGTCCGTG80.15822784810126583No Hit
GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA80.15822784810126583No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG80.15822784810126583No Hit
CATTCAAATTGACCTCCCTCAGGAAGCTAAGAAATACTATCTCGGCAATA80.15822784810126583No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCT70.13844936708860758No Hit
GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTAC70.13844936708860758No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT70.13844936708860758No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA70.13844936708860758No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA70.13844936708860758No Hit
TCTTTTACTTCCTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTCGG70.13844936708860758No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT60.11867088607594937No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC60.11867088607594937No Hit
GTGCTGTCGTCGTGCGCGCGCACCGGCCGGCTGCTGGTGGTCCACGAGGC60.11867088607594937No Hit
ACCTACATCCACGCCGAGGCCTACGCCGCCGGCGAACTCAAGCACGGCCC60.11867088607594937No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT60.11867088607594937No Hit
GTCTGGGACACTTGGCCAGAGGGGATTCTTCCTGTTGGGGCTGCAACAGA60.11867088607594937No Hit
ACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACC60.11867088607594937No Hit
ATCTATATCTATGTCTATGTCTGTGTCTTTGTCCCTGTCTGTGTCTGTGT60.11867088607594937No Hit
GACTACAAGTGTGCACCATCATACCCAGCTAATTTTTTGTTTTGCTTTTT60.11867088607594937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)