FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2887
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA80.27710426047800485No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80.27710426047800485No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.24246622791825423No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.24246622791825423No Hit
CCTCCGCAACCATGTCTGACAAACCCGATATGGCTGAGATCGAGAAATTC60.20782819535850364No Hit
TATTAACCCAGCATGGTTTGTTCTAATGCTTCTTGTTGGCAGCTGCCACC60.20782819535850364No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG60.20782819535850364No Hit
GGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATG50.17319016279875304No Hit
GACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTCCGCAA50.17319016279875304No Hit
GTCCAGGTAGCGGCGTACGCCGCGCAGCTCCGCGGGGATGGGCGCCTGGC50.17319016279875304No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC50.17319016279875304No Hit
GTATCAACGCAGAGTACATGGGAAGCCAGTGGTATCAACGCAAAAAAAAA40.13855213023900242No Hit
GAAGAAAGTGGGGTTGGGAGAACCTCCCCAACCCCATCCCTGCTGGCCCG40.13855213023900242No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG40.13855213023900242No Hit
CTCCTGGAAGTTCACCTCCTGGTCCTTGTTCCGGTCCAAGTCTTCCATCA40.13855213023900242No Hit
CTCTCCAATTTTACTGAGGTGGCTGACCACGTCCACGACCAAATCCGCCT40.13855213023900242No Hit
CAATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAA40.13855213023900242No Hit
GTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTC40.13855213023900242No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC40.13855213023900242No Hit
GTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTT40.13855213023900242No Hit
GTTCTAATGCTTCTTGTTGGCAGCTGCCACCTGTCCGGCGATTCTGTCCA40.13855213023900242No Hit
TCTGGGGACAAGGCCTGGCATTTGCCTGGACAGTGGCCCTGCAAGCAGCC40.13855213023900242No Hit
CTTCGGACCACGCTGACCTGTAGGTCCGGGGGCGCGGCGGAGCTGGGACC40.13855213023900242No Hit
TCCAGGAAGTTGGTGAACCATCTAAAGAAGAGAAGGCTGTGGCCAAGTAT40.13855213023900242No Hit
GCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCC40.13855213023900242No Hit
GGCCATAACTGAGTTATTTTTTTCATCAATCAGGAAAATGCTTCCTTAAT40.13855213023900242No Hit
CGCGTGTAGAACCAGTTCTCATCGTAGGGAGCAAGCTCTTTGTGCTTGGC40.13855213023900242No Hit
CTAAGTACCAGTGTGTACATTGTACACATTTAAATGACTCACGAGAATGA30.10391409767925182No Hit
ATCTACTTTTTTCGTCGGCAGCGTCAGATGTGTAAAAAAAAAAAAAAAAA30.10391409767925182No Hit
GCCTCTTGGTGGTGAAGCGTGGCTTGTGCTGACGGCGCAGGACCCGGTGG30.10391409767925182No Hit
GACAGATGGGAAAGGCAGGCGCGGCCTTCGTTGTCAGTAGTTCTTTGATG30.10391409767925182No Hit
GTGCAATCTCGGCTCACAGCAATCTCCGCCTCCCGGGTTCAAGCCATTCT30.10391409767925182No Hit
CCTCTTCACTTTCCGCTCTTCCATTGTTTTAAGTTCCTTATTGCACCACG30.10391409767925182No Hit
GCCAAGGATGGGGTCTCCACCACCTGGTTTACTTGAAAGTGTGGCTCTCG30.10391409767925182No Hit
GATTAAACTGCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTA30.10391409767925182No Hit
GTCGCAGGTCGCCTGGTTCTAGGAATAATGGGGGAAGTATGTAGGAGTTG30.10391409767925182No Hit
TGGTGACACGCTGTGTCACTTTCAAGGAGGGTTATAATGAGAGGATCGAC30.10391409767925182No Hit
GTCCTTGTTCCGGTCCAAGTCTTCCATCAGCCTTGCAATTTCAGCATCCT30.10391409767925182No Hit
ATCAACGCAGAGTACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAGCT30.10391409767925182No Hit
GCCTCGCCATCAGCGACAGCGCGGGCGACTGATCGACCTCGGGCGTCGCA30.10391409767925182No Hit
CTCCAAGCCCAGCCCTCAGCCATGGCATGCCCCCTGGATCAGGCCATTGG30.10391409767925182No Hit
GCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTACTCTAGATT30.10391409767925182No Hit
AACTGAAGAAGACAGAGACGCAAGAGAAAAATCCACTGCCTTCCAAAGAA30.10391409767925182No Hit
ATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAA30.10391409767925182No Hit
GAACTAGAGCGCATCCCACTCAGTGAAATGACCCGCGAAGAGATCAATGC30.10391409767925182No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA30.10391409767925182No Hit
GGCTTTAACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTAG30.10391409767925182No Hit
AATATGCACTGTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTT30.10391409767925182No Hit
AGGAGGTGGTGGCTGCCCGGAGATCAGGGCCAGGCTGTGCTAGATGGCGC30.10391409767925182No Hit
GAGTGGGAAAATGATCTTTCTCTGCAGTGTGGCCGTCTAGCAGCTAATCT30.10391409767925182No Hit
AGCACACCCTGAGCAAGAAGGAGCTGAAGGAGCTGATCCAGAAGGAGCTC30.10391409767925182No Hit
CTATGAGGGTGGGGGAAGTGTCTGAGAAGTAAAAGAGAGTAAGACAATGT30.10391409767925182No Hit
CTTCAAAGTATTATTAAAAACATATGGATCCCCATGAAGCCCTACTACAC30.10391409767925182No Hit
GACAGAAGGATGTAAAGAATGGAAAATACAGCCAGGTCCTAGCCAATGGT30.10391409767925182No Hit
CCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTAC30.10391409767925182No Hit
ACCTCGCACGGTCCGCCAGAAGATGCGGCTGGGGGCCCGGAAGTGGTAGG30.10391409767925182No Hit
CTCCTGAACCCGCACATCATCAGTTATGGTCCCCACAACCACGGCCGTCT30.10391409767925182No Hit
TGCTTGTGGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATT30.10391409767925182No Hit
TAATTCTACCACGCCTTATATTTAAAGACAAAAAGAAGTGTCTAACAACA30.10391409767925182No Hit
TATCAACGCAGAGTACATGGGGAGCTCAGCAGCTGAAGCCATGGAGATTA30.10391409767925182No Hit
CAAGAAGAAACGCCTGGTGCAGAGCCCCAATTCCTACTTCATGGATGTGA30.10391409767925182No Hit
TAACAACCTCTAGGATACGAACTGTACTAGCAAAATCATTTAACCGTCTG30.10391409767925182No Hit
GCCGACACCGGCGTGCTCGATTCCGTGATCCGCTTCCACGGCCAGCGCGT30.10391409767925182No Hit
GTAATGAGGCGTGCGCCGCCAATATGCACTGTACATTCCACAAGCATTGC30.10391409767925182No Hit
ATAGAAATGTTCTGAGGCAGGGTCAGGGGAAGAAAGCTCTCGCAGAACCT30.10391409767925182No Hit
TGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCG30.10391409767925182No Hit
CTATGACTCCTGCATTATCTTCAAAATAAAGAAACACGCCATCTTTTCTA30.10391409767925182No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10391409767925182No Hit
TCCTTCTGTAAGCCTTGCTTTTCCTCCTGTAGGCTGGCAGAGGACAGTGG30.10391409767925182No Hit
CTCTAGGGAAGAATCCCACTGATGCATACCTTGATGCCATGATGAATGAG30.10391409767925182No Hit
GTACATGGGATCGCCGCGAAGCCGGTCGCGCGCAGCTCGTCCCGGCCCTG30.10391409767925182No Hit
CAGTTTGCGACCGCCATCTTGGTCCTTTTCCACCATTTTCAGCCCCTCCA30.10391409767925182No Hit
TCTTTTAGCTGTTTAACTTTGTAAGATGCAAAGAGGTTGGATCAAGTTTA30.10391409767925182No Hit
CTTCAGGGCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCTAAAT30.10391409767925182No Hit
GAGAAAGGAAAGCCAAGATGACAGATTTTGATCGTTTTAAAGTTATGAAG30.10391409767925182No Hit
TTCCAGGACTGGCTACTGCGTACATCCACAGGTTCACTAACGGGGGCAAG30.10391409767925182No Hit
TCAATAGGTCTTTTATTGCATCATTTAAATATCACAAGTAGGTCTTAAGT30.10391409767925182No Hit
ACCTGTACCTCCGGGGTGGCGCTGGGGTTGGCTCCATGACCAAGATCTAT30.10391409767925182No Hit
CCTGAAGGAACATCCTTCTGTAAGCCTTGCTTTTCCTCCTGTAGGCTGGC30.10391409767925182No Hit
GACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGAAAA30.10391409767925182No Hit
GGGCGGAAATTCGCCTGAAAAGTTTTGCCGGCGCACAAGCACGATCGGCT30.10391409767925182No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT30.10391409767925182No Hit
AGCTTGTTGAGCGCGCCGACCTTGCGCGCCACCGCGGCGGGCGAGAAGTC30.10391409767925182No Hit
CCTCCCTACCGCTCCAAGCCCAGCCCTCAGCCATGGCATGCCCCCTGGAT30.10391409767925182No Hit
AAGCATCTGCAATGGTGACTTCCACCTCAACTCCTGGCTCAATACTGATG30.10391409767925182No Hit
GCTCAGAAAGGAAGAGGCAGGCGCCAGGGGGAACCCCCTTCGTGTTTTGT30.10391409767925182No Hit
GTCCTCTGGTGCGAAATTCCGGATTTCCTTGGGTCTTCCGGTAGGAGCTG30.10391409767925182No Hit
GCAGAGTACATGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTT30.10391409767925182No Hit
CGGCGGCAGCGGCCGCTCGCGCGGCACTGGGGAGCAACGCCGCGTCACGC30.10391409767925182No Hit
GTATCAACGCAGAGTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCA30.10391409767925182No Hit
CAATGCGCCATCAGCACCGGCACGGTCGCGTGCGACAGGATGTGGCTGGT30.10391409767925182No Hit
GTGTAATATGGTACCAGTTCTTCTGGTGGAAGCATTCTTTTTGGAATGGG30.10391409767925182No Hit
ATACAGTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTC30.10391409767925182No Hit
ACACCAAGCTGCAGATCCAGGCTTTTCTGGGAAAGTGAGGCCACCATGGC30.10391409767925182No Hit
TTCCACATCACCTCTGTAGCCTTGCTGTTCATTGCCACCGTCGACAATGC30.10391409767925182No Hit
GCCACTGACAAAAATGACCCCCATTTGTGTGACTTCATTGAGACACATTA30.10391409767925182No Hit
CTTCTGAAGAACCTCCGTTTGCACCTTCTTCCCGTATTTCCTAAGTGCTC30.10391409767925182No Hit
ATCGTCAGCTGGGGGTGGGCTCGGCGGTCGCGGTCGCGGCGCACGAGGTC30.10391409767925182No Hit
GTACTTTGCCTCAGTGGTTGCACAGTAAGGGGTAGAGGGTAGATGAGGAC30.10391409767925182No Hit
GGCTGAAGGAGAGAATGTATTTGGTGTCTGCCATATCTTTGCATCCTTCA30.10391409767925182No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGC30.10391409767925182No Hit
ATCTTGGACAGCGTGGGTATCGAGGCGGACGACGACCGGCTCAACAAGGT30.10391409767925182No Hit
TACTGGTGGTGCTGTAGGCTTTGCGGTGGCAATCGGTGCCATCGGGGATA30.10391409767925182No Hit
ATCTAACACGGCTTGCTGAAATTTACAGGCAGACTGACGTTTTCTTTCAC30.10391409767925182No Hit
CTACTACACCAAAGTTTACCAGGAGATTTGGATAGGAATGGGGCTGATGG30.10391409767925182No Hit
GAGTACCTTCCATCTGTTCCCACCAGGACTCCATCTGCCTTGTTTCCGAC30.10391409767925182No Hit
CAGTGAAATGATCCGCGAAGAGATCAATGCGCTAGTGCAGGAGCTCGGCT30.10391409767925182No Hit
GATCGAAACGGCGTCGACCGACGAGATCCTGGGCGCGTGGTCCTGATCGC30.10391409767925182No Hit
GAGTTGAAGGTAGTTTCGTGGATGCCACAGGACTCCATGCCCAGGAAGGA30.10391409767925182No Hit
GGAGGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGG30.10391409767925182No Hit
GTAGAACAGCAGGCAGTCCGGATTGGCGGCCTTGATCTCGATGTACTGCG30.10391409767925182No Hit
GGAGATAGTCGCGCAGCGGAGGAATGGCGACGTCGGAGCCGGCGTACTTG30.10391409767925182No Hit

[OK]Adapter Content

Adapter graph