FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCAGGATGCGCTGGGCGATCAGGTCCAGCTGCACTTCGGAGGTGCCG24.25531914893617No Hit
GTTTCACTCTGTCGCCCAGTCTGGAGTGCAGTGGCACAATCTCGGCTCAC24.25531914893617No Hit
TGCCGGAGCCGCCGGCCGAGCGCCGCAAACGGCTGCAAACCGAATGGGGA24.25531914893617No Hit
ATACACCAGACTCAGCTCAGATATCAAGCAGGAACCTAGCAGAGGGCTTT24.25531914893617No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC24.25531914893617No Hit
AGACACCCCAGGAAGTCCTAGCAGAGAGTTTCAAGGCAGCCCAGCAAACT24.25531914893617No Hit
GAGTACGGCTCCTGCCGCTTTTTAGGCGCCGAGATGATCGGGCCGCGCGG24.25531914893617No Hit
CCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGATTACCATGG24.25531914893617No Hit
CCACCATGCCCAGCTAATGTATTTATTTTTTGTAGAGATGGGGTCTTGCC12.127659574468085No Hit
GGCGCCGTGGGACCCCCTGGCTCCGCGTGCACCGGGACGGCCCCGCGCTC12.127659574468085No Hit
CGGTGGCTGACTCACGCCTGTAATCCCAACACTTTGAGAGGCCAAGGTGG12.127659574468085No Hit
GCCCAGTTTGACTTTATACATTTTGTACCATTGGTTTACCCCTGTGAGGT12.127659574468085No Hit
CCTTATAACGGCGATTGACACGCACCTCGGGGACGTTATAGGAGTTTAGC12.127659574468085No Hit
CCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGG12.127659574468085No Hit
GGGAAGTTTATAGCTATAAGTGCATAAATAAAAAAAATAAGGGAAGCTTC12.127659574468085No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT12.127659574468085No Hit
GGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTG12.127659574468085No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGAT12.127659574468085No Hit
CTATTATCCTGGGATTATGTTTATAAATTTTTCTACCATCTGAATTGTTA12.127659574468085No Hit
AGACGGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCA12.127659574468085No Hit
CTAGGCATCTTTGTGGGCCAGCCATGAAATCTGGCTTGCCCACTACTCAC12.127659574468085No Hit
GCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGGTCGATTCCGGAG12.127659574468085No Hit
CCCCTGGTCCGCACCAGTTCTAAGTCGGCTGCTAGGCGCCGGCCGAGGCG12.127659574468085No Hit
TTTCCCATTATGTGGGTTGTCACTTCGCTTTACTAATTGTATTCTTTGCT12.127659574468085No Hit
AATTTGACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATT12.127659574468085No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA12.127659574468085No Hit
AGTAGTGATAATTCCTCTCTGGAGAACAATAACGTGACCATAGTCCAAAA12.127659574468085No Hit
GATGTGTATGGGTCTATTATACATGTTTATAAATGTTGCCGGGTCCATGA12.127659574468085No Hit
TAACTGATCTGTTCTTTCTTACTTGTAGAAGATTCCAAGCAAGAAAGTAT12.127659574468085No Hit
GGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT12.127659574468085No Hit
GTGCTGCGGGCCGCGGGGGTGCCGGGCAGCGGAGTGCTCGACGGCGTCGA12.127659574468085No Hit
ATGTTCGAGGGAGCCGGCGGTGCCGTCCAGGAAAGCGAACTCGAAGGATT12.127659574468085No Hit
GACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTACCCAG12.127659574468085No Hit
CTGTTGGAGCCCAGGTCGATGGCGGCGATCAGGGACAGATTCTTGGCTTG12.127659574468085No Hit
ACAGAACGCTCTCCTACCACTTGCAATAAATTGCAAATCCGCAGCTTCGG12.127659574468085No Hit
GTACTGCGGTGCGCGGCTCGATTGCAGCCGAGAAGCGCGGAACCCGCAAG12.127659574468085No Hit
TGTTAAGTTCCCTATAAATTCTGGACATTAGGCCTATTAGAGGGCGGAGG12.127659574468085No Hit
ACATTACACTTTTTTTTGAATGTCTAAAGGGTATCTGAAAGTATAAGGCA12.127659574468085No Hit
AAGGATAAGATTGTACCTCGTCCTCTGTGCGGGCACCTCCATCGTATATC12.127659574468085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)