FastQCFastQC Report
Fri 10 May 2024
EGAF00003659790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Total Bases7 kbp
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATATGGGTACGGCCCGGCGCGAGATTTACACCCTCTCCCCCGGATTTT36.0No Hit
CTGTAGTTTGGTTTGCATTTTCTAGAATCTTATACAAATGGAATTGCACA24.0No Hit
ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATC24.0No Hit
ATCTATACCAGCAAAACTCATAAAGGTCATCAGTACATGTCTGGTCTAAA24.0No Hit
ACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGG24.0No Hit
CTCTTTGATGAGGTGGACCTCGGCGGACTCCCTAGCCAGCAGAAATGGGG24.0No Hit
CTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAG24.0No Hit
GAAGAAAACTGAACCCAACCCAAACCTCTGTGAAAGCCAGTCTCCTTGTC24.0No Hit
TAATAATGGATCATGTAATTTTAATTTTTCCAAAAAAACAGCTTTTATTT12.0No Hit
CTTTGGGCTAGAGTGGCGACGCCAGCACCTGGGTAAGGGACATCTGCTCC12.0No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCTGAGTGTC12.0No Hit
ACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGG12.0No Hit
GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC12.0No Hit
TCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCT12.0No Hit
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG12.0No Hit
GAAAGACTGAGAATAGAATCCCTCAAAGGGAAGAAGGAAACCAGGAACCT12.0No Hit
GAGCCACCACTGCGCGCTTAGAATCGAACACCCATTTCTTTTGCTCGTCG12.0No Hit
GTCTGTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGC12.0No Hit
CTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTC12.0No Hit
GCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCC12.0No Hit
CCTTTAAAAAAGTAATACCAAACCATAAAGTTAAAATCTATGTATATTGA12.0No Hit
GGACAGTGCCAGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGG12.0No Hit
TATTTACTTTTGCACTTGGAGCTGCTTTTAATTTTAGCAAAATGTTTTAT12.0No Hit
CATCAGTACCCCATTCTATCATCAACGGGTACAAACGAGTCCTGGCCTTG12.0No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTAA12.0No Hit
CTTGTATCGCTTTCATTTTGAACTTTATGGTATGCCACGAATTTGGGCAC12.0No Hit
TCTTTGGACAGCCCTGAAAGGGAACCTATCCTATCCTCGGAACCTTCTCC12.0No Hit
GGGACAGGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGC12.0No Hit
AAGCTCCAGCGCTATTTCCTGGTGCCAAAAGCTGCCTTTCTGCGTCCTTC12.0No Hit
GTGAAACCCCGCCTCTACTAAAAACACAACAATTAGCTTATCATAGTGGT12.0No Hit
AATGCCTACTGCATAAAATCCAAGCATTTGCTGTGAACAGTTGGAGAAAG12.0No Hit
AATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGA12.0No Hit
AGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGA12.0No Hit
GAACTAGATCACTCACTGGAAATCAGAAAGCATTCAGTCAGTCTGATAAT12.0No Hit
CAATTACAATGACAGATACGATGAGATCCGCCGTCACTGGGGTGGCAATG12.0No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA12.0No Hit
GCCCTGGGGCCTGCCCGAGTGGGCACACCGCGCGCTGCACTACGCGCCGG12.0No Hit
AATTTGTGTTGTATATATTCGTATTCCATGTGTTAGATGGAAGCATTTCC12.0No Hit
CTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTT12.0No Hit
CCTCATAACGCGCGGTCGAGCCGGAGCCGTCATGGCCCGTCGCATCGAAG12.0No Hit
CCCTCCAGTTATGAGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACAT12.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)