FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGGAATGATCAGATAATAATCTTGCATTTGTCGGGATTGCAGCTGCA28.695652173913043No Hit
TCTATGCTGCGGGTGCTAAACTGGTGCTCTGTGGCCGGAATGGTGGGGCC28.695652173913043No Hit
GTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCG28.695652173913043No Hit
CCTCGGGAGACATGCCTGGCTTATATGCTGCATCCACATAACCATAGATA14.3478260869565215No Hit
CACCGCCACCCTGAGTGTTATGTGTGCACTGACTGTGGCACCAACCTGAA14.3478260869565215No Hit
GTGCATACCACTAGCATATGATTTTTGTAGTTTTTTAATGTTAAGTTTGT14.3478260869565215No Hit
GCCCTACCCCCGCATCCACTTCCCTCTGGCCACATATGCCCCTGTCATCT14.3478260869565215No Hit
GCTGGAACCGGTCTTCTAGCACCGCCAGGGCCGCGTCCTGACCCTGTCTC14.3478260869565215No Hit
CTCCTGAGATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGACTACAG14.3478260869565215No Hit
GGAAGGTCCAATCTCCATTCTGGATCAGGCCTGTGGACACCACCCCAGCC14.3478260869565215No Hit
ATGTGAAACAAGAAGTTCTGGGTCCTTTCATCATAAGGGAGAAGCTTCAG14.3478260869565215No Hit
GGCCAGCTCATTCCACACCTGCAAGGGTCAGATCAAGAAATCCAAACCTA14.3478260869565215No Hit
CTACAGGACTGGGGTGAAAGTGGATAAAGCAACATTTATGGTTGGCAGCT14.3478260869565215No Hit
GTTTGGAATGATCAGATAATAATCATGCATTTGTCGGGATTGCAGCTGCA14.3478260869565215No Hit
TCCCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTG14.3478260869565215No Hit
ATATGCAGCAATATCCTTTTCGTATTTTTCCTTCAGCTTCGCAGCCTTCT14.3478260869565215No Hit
GAGCCATGTAGTGTCTGCATTGCTGTGTCCAGGGATTCTTTGTTTGTTCG14.3478260869565215No Hit
ACAAGAGAGGCCAGCTCAGGAGAGGCTATGTACTTACGAACCATATCAAG14.3478260869565215No Hit
GCCGCAAAGAAGACGAAAAAGTCGCTGGAGTCGATCAACTCTAGGCTCCA14.3478260869565215No Hit
CTGCTGATAAATACACTTTTTCCCAAGCTTGGAACAGTCTTTTCCTTTCT14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)