FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAAAGAAGCAGAGCTAACGAGGAAGGGGATTTAAAGAGTTTTTCTTG313.043478260869565No Hit
GGCCAAAGTAGTTTGTCTCCATGACCCTCTTGTCCACATCCACTGTGGTG28.695652173913043No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG28.695652173913043No Hit
GCCATGATCACGCACTGCACTCCAGCCTGGGCCATAGAGCAAGTACTGCC14.3478260869565215No Hit
GATTAGAGGAACGAGCCCACCGTGCTCGGCTAATTTTTGTATATTTAGTA14.3478260869565215No Hit
GGTTAAAGGTGAGCACTTGTAGAACATACAGCTGGTGCGCCATCTCATTG14.3478260869565215No Hit
GCGCGGTGGGTGAGAACGGCGGGGAGAAACCCACTCCCAGTCCACCCTGG14.3478260869565215No Hit
CATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACT14.3478260869565215No Hit
GCTCCTAGATTAGGGGTGGCATTTTCATAAAACAAGACTATTACTGTTTT14.3478260869565215No Hit
GAGCGGGTGCGGTTGCTGGAAAGATGCATCTATAACCAAGAGGAGTCCGT14.3478260869565215No Hit
GGGAACACAGTGACCACTTCATAACCCTCAGGTGGTGTGACTCGCTCCCG14.3478260869565215No Hit
GCTGTGGACAGGGAGGAGGGACAGGGTGCTGAACACGCCTGAGAGAATTC14.3478260869565215No Hit
GGTCAGGACGCGGCCCTGGCGGTGCTAGAAGACCGGTTCCAGCCTGTCTC14.3478260869565215No Hit
CAGTTCAATATTATTGCCACTGTAGTGATGGACACCAGTTTTAGCCAACA14.3478260869565215No Hit
CTCTGGTTCAGCTGCTGATGCCCAAGCCGTGGCCGACATGGCCGCCTACC14.3478260869565215No Hit
GTGTCACATTGGTTCACAAATTGAGTCACATTTCCAGGTGAGGCGGAACA14.3478260869565215No Hit
GCTATTTCCAACTATATATAATTAATTACAAATATTTTCATAAAAGCACT14.3478260869565215No Hit
GCCATGTATTTACCATGGCGAGGGTCACATTTCACCATCTGGTTGGCTGG14.3478260869565215No Hit
GAGACCCTGGTGCCTGGCTTTTCGTCACCCTGGACAAGACAAACCAAGTC14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)