FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGGAGGTGCGGAAGTTCCTGTCACCTAAGTGCTCAAGCAGAGGCCAG212.5No Hit
GTCATAGGCCTCTTCAGGGCTAAGATTAGGCCGATAGCCACTGTCCATGA16.25No Hit
CTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCC16.25No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC16.25No Hit
CTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATACAGGCC16.25No Hit
ACTTAGTGGTGACAATAATGTCTCCTTTGTCATTTTTGGCTTGTCCCACT16.25No Hit
GGATTGTTCTGGTCTTACTCATAACTGGGTGGTTTGAGGGTGACTGAAGT16.25No Hit
GTCTAGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC16.25No Hit
GAATTGGAGACCTGGATCTAAACATGGGCTAGCTACCCATCCTGGCATCT16.25No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG16.25No Hit
GTGTAACCCTCACCTGGCAGACATTAAACAGCGTAAACACATTCTCAGCA16.25No Hit
ACTATGAGGTCTCTGGGGGTACAGTCAGAGAGCTGGTGGAGGCCCTGAGA16.25No Hit
GTTTTTTCATGTCCCGCATAATCCTCATTTGAAGAATCAATTAAATGCAG16.25No Hit
GGGGTCCGCAGCGTTGGAGATCCTGGGCCTGGTGCTGTGCCTGGTGGGCT16.25No Hit
GGAATTACCTGCACACAGTTTTCAGGGAAAGAAACCAAAAATGGAAATGG16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)