FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTTGCAGAAAGAGATGCCAGAGGCTCTTGAAGTCACAAAGGGGAGGCG28.0No Hit
CTCAAGCACTAGGAGTGATGACTTTGCTAACATAATTCATCCTCTCACCT28.0No Hit
AGTCAGGATGGTGTCACATTTTTATGGAAATGGAGATATTTGTGATATAA28.0No Hit
GTAAAGAAGGGGTTTCCAAATACAGCAGTTTATAAAACAGTCCTGGTGAG28.0No Hit
ACCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGG28.0No Hit
GCAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCGGGCGGGCACCTGT28.0No Hit
AATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACT14.0No Hit
ATTCAGTGAGGCTCACTCCGAGTTCCTAAAAGCAGCCAGCAACTTGAGGG14.0No Hit
AAGCGGGCGAGAACGAGAGAAGGCAAACTTCAAATTGAGCTGGCTCAGCT14.0No Hit
GTGGATGCATGGCTGCGAGCTGGGGCCCGACAGGCGCTTCCTCCGCGGGT14.0No Hit
GGATGGGCACATCAGGGCAGTGGTGGCACACCTCTGGATGCCACTTGTGC14.0No Hit
GGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCCCCCGGCCGTC14.0No Hit
CTTCAAAGCCATACTATTTATGTGCTCCGGGTCCATCATCCACAACCTTA14.0No Hit
CTTCTGGAGTTCCTCAGGGAGGGACTCGTAGACCTCGACGGGGTCCAGGC14.0No Hit
CTGCTCCGCCTCACGGGCCGCCTCCCACTTGCGCTGGGTGATCTGAGCCG14.0No Hit
TCTTTGATTGTGTAGTAAGGGTGGAAGGTGATTTTATCGGAATGGGAGGT14.0No Hit
AGCGTGGACCATCGGGGCACTTGGAACGGGCCCTGGGTGTCCACTGAGGT14.0No Hit
CTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCT14.0No Hit
CTGTGGGACCGACCCGCTCACAGCTGAAGGTTATGGGCCAACAGAGTTTA14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)