FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAATGAAGGTGTGCAGGTGTGTACAGGTGTGTGGATGTGCAGGTGAGAG28.0No Hit
CCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGG28.0No Hit
GTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACC28.0No Hit
TCGGAGCTGTGGTCGCTGCTGTGATGTGTAGGAGGAAGAGCTCAGGTGGA28.0No Hit
GAGGTTTGAATTCATATCGCCTGAGTTGCTTTTACTTCTCTATACAAAAT28.0No Hit
CTTCCTTTTCCTCCTGCCGCAGGTGCCGGAGAACCTCCTGGGACAGCGAG28.0No Hit
ATGATGTGGTCTTTGGAGTAGAAACCTGTGAGGAAAGGTATTCCTGCTAA14.0No Hit
GGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTA14.0No Hit
ACTCAGAGGAGGTGAGGGAGCAGAAACACAAGACCATCGTGGAAAAATAC14.0No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14.0No Hit
CTCCAGAAGGCACCACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCT14.0No Hit
CTTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCG14.0No Hit
GTACATGGGGCCGCCCCCAGCTCCCCCGCCTCGGGGAGGGCACCAGGTCA14.0No Hit
ATATCATTCTGAGGGGCCACAGTAATTACAAACTTACTATCCGCCATCCC14.0No Hit
CATAAGAATCTGATTCCTCAGGGCATCGTGAAGCTGGATCACCCCCGCAT14.0No Hit
AGGTATTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTT14.0No Hit
CAGGAATCTCTCCAGCAGTGCTCTCCAAGCCAAAATCAGAAAGTTCATGG14.0No Hit
GTATCAACGCAGAGTACATGGGTGTGAGACTCCATCTCAAAAAAAAAAAT14.0No Hit
CTGTTTTTTCATGTCCCGCATAATCCTCATTTGAAGAATCAATTAAATGC14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)