FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACCGTGGTGTTCGTCGCTGGAACCATGGTCTTTGGCCTGTTGTGGGCT42.2346368715083798No Hit
TCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCT42.2346368715083798No Hit
CTCCGAGGGGTAACAGGTGGCAGAAAAGACATCAGTTTAAGGGACCCTCA31.675977653631285No Hit
AGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGC31.675977653631285No Hit
CTCTAAAGGCTGTCTTCAGGCCGGGCACAGTGGGAGGATCGCTTGAGCCC31.675977653631285No Hit
GTTGCTGGCTAGCACCTTGAACTTCTCAGCCCAAGCCTCTAGGTCCAGCT31.675977653631285No Hit
ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC31.675977653631285Clontech Universal Primer Mix Long (96% over 26bp)
GGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTT21.1173184357541899No Hit
CCAATAAGAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAA21.1173184357541899No Hit
GACAGTGACTTTGTTATAAAAGCAAGTTCAGCCCTCTCATGCTCTCTCAT21.1173184357541899No Hit
GGCTGCAGCCACCGCAGCTGCCATGGTGAGTAGAGATATCAGCTCTCTCC21.1173184357541899No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA21.1173184357541899Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AGGAGGAGTGGCAGGGGGCAGATAACTTCAGGAGGTGAGCAAATTGGATT21.1173184357541899No Hit
CTCCTAAGGTGCTGGGATTGCAGGTGTGAGCCACCACGTCTGGCCATACT21.1173184357541899No Hit
AGCCCTGGGTGCGAGAGTTGATGACGTCGATCTCGTGCAGGGACACGGTG21.1173184357541899No Hit
GCCTGTCGGTGATCGCCTTCGCCACGCTCGACGACCTGCTGAGCTACCTC21.1173184357541899No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21.1173184357541899Clontech SMART CDS Primer II A (100% over 21bp)
TCGCTGGAGCCGCCGAAGGCCATGAGCTGGTCCGGGACCACGTGCACCGC21.1173184357541899No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA21.1173184357541899No Hit
GTACACGGCATGAGACAAAATGAAATCCATTTTGGAAGACTCAAAGACCT21.1173184357541899No Hit
CCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCGCCGTGGGCTAC21.1173184357541899No Hit
GCCCCTGACGGGTGCGAGCACCCTTCTTCCCTGCAGCTCGCTTGAAACGC21.1173184357541899No Hit
TTACAGGTGTGAGCCACCGCACCTGGCCCCAAGCATTTTCCTGCATCTTC21.1173184357541899No Hit
GGAGGAAGAAGCGCGAAGAGCCGTTAGTCATGCCGGTGTGGTGGCGGCGG21.1173184357541899No Hit
GCCACGGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCC21.1173184357541899No Hit
ATATTTATGTTACCACCATTCAATATTGGAGATTAAAAGGGATCAGGAAG21.1173184357541899No Hit
GCATCCATTATTTTCTAAAACTTTAACTGCTTCCCAAATTTCCCCAATAT21.1173184357541899No Hit
GCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTATATGTGGCCTACA21.1173184357541899No Hit
GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAAAAAAA21.1173184357541899Clontech Universal Primer Mix Long (95% over 21bp)
CTCTACGATCAGGGTGGCCCGGTGGAAATCCTGCCCTTTCTGTACCTGGG21.1173184357541899No Hit
CCGGGGGGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTA21.1173184357541899No Hit
GGTCCTACAAGTGCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACT21.1173184357541899No Hit
TTCTCACACTGCTAATAAAGACATACCCAAGTCTGGGTAATTTATAAAGG10.5586592178770949No Hit
GTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTAT10.5586592178770949No Hit
TCCGAAATGTTTCATTGTGGGAGCAGACAATGTGGACTCCAAGCAGATGC10.5586592178770949No Hit
CTCCAAATTGTTTCATCCTACCACTCCCAATTAATCTTTCCATTTTCGTC10.5586592178770949No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG10.5586592178770949No Hit
AGGTAGAAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATCTCCTC10.5586592178770949No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG10.5586592178770949Clontech SMARTer II A Oligonucleotide (100% over 25bp)
ATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGT10.5586592178770949No Hit
CATCTAAGGGCATCACAGACCTGTTATTGGTCAATGTCGGGTGGGGGGGG10.5586592178770949No Hit
CCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTA10.5586592178770949No Hit
CCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTAT10.5586592178770949No Hit
CAACTCATGTATTTCCAGCCCCGAGTGTTGGCAAAAACATTTTCATATTG10.5586592178770949No Hit
GGGATAGAATCCAATTGCCCTTGGAATGGAAGTAGAATATCCTTTTTAAG10.5586592178770949No Hit
GTGAGCCACCGTGCCCAGCCAGCTGGAATTCTTGAGTAGCCACTGCCTGC10.5586592178770949No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG10.5586592178770949No Hit
GAAGATTTGATTAAAGCAAAAGAAAAAGAAGTAGAGAAAATTGAGCAGAA10.5586592178770949No Hit
TCGCCACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCC10.5586592178770949No Hit
GTCCATGAAATTGTCTCCTGTGACGGTGTTCCTACAAAATGGAAAGATAG10.5586592178770949No Hit
CCCTTGGCTTCCCTGGGGCACACTGGAAGAACTGTCTTGGGCCACACAGA10.5586592178770949No Hit
GTTCATATCCTTTGCCCACTTTTTGATGGGCAAAGGATATGAACAGACAC10.5586592178770949No Hit
ACTGTGCACTGCCCATTGACCATTTCTACTAGGATGCCTTGAAGGCACCT10.5586592178770949No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATG10.5586592178770949No Hit
AGATTATGTGGCTGCAACTTTCGACATCTGGAAGTTCAGAAAAGTTCTTT10.5586592178770949No Hit
GTCAGTGACTGTGATCACAGCTGTTGCTGTTGTGCTTAACCCCTCACCTT10.5586592178770949No Hit
TCTTCCACCCCCCACTCTACATCAAAATGTGCAGCTTTGACACGACAGGT10.5586592178770949No Hit
GTACGAGAGGAACCGCAGGTTCAGACATTTGGTGTATGTGCTTGGCTGAG10.5586592178770949No Hit
GTGCAATAGAGTTCAAAGAAAGACCATTATTGACTGAATTGATCAGGTAA10.5586592178770949No Hit
GTCCGGAACTCTGGGCCAGGGAGGCGAGAAGGAGAGAGAGAGGAAGAGCC10.5586592178770949No Hit
TTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCGC10.5586592178770949No Hit
AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTT10.5586592178770949No Hit
ACACAAGGGGTGGATTATTCATGAGTTTTCCAGGGAAGGGGTGGGCAATT10.5586592178770949No Hit
CCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGC10.5586592178770949No Hit
CAATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAA10.5586592178770949No Hit
GCCGCATGCCGGTGATCTCGTCGATCGTGTGCGAGGGCCTGGCAGAGACC10.5586592178770949No Hit
CCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCGCATCGCCGGT10.5586592178770949No Hit
GGACTGAGGGGATGGAGAGAACCAGCAGAGCTCCCCAAGTTTGGGGGCCC10.5586592178770949No Hit
GAGGTTTCCCGTGTTGCGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGG10.5586592178770949No Hit
CNTCAGCTCGCAAGTGCTGGCAACCGGCGCTATAGCAAGTCCTATGATAG10.5586592178770949No Hit
GCACCTGGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAGCCAG10.5586592178770949No Hit
CATGGCCTCTGAGGAGATTATCATCAGGTTTTTTGAAGCCTAAGTAAACT10.5586592178770949No Hit
AAATTTGATTTCAGGAACTATGTAAGGTGCTTTGACTTTTCTGAAACTCT10.5586592178770949No Hit
GTTTATGTGAGTCTTTGAGAGTCAACAAAGAGCTCTGTTTTTGTGCCAGA10.5586592178770949No Hit
CTTTATATAGTTTTTTATTCAGCTAACTACTTTCTATAAACCATGTGACA10.5586592178770949No Hit
TGTTTAGGAAAAAAAAATAATTTTATTTCTTCCTTTCCCATTTGGATGCC10.5586592178770949No Hit
TAGAGAAGCAGCATAGCATAATGATTTCAAAGAGCATGCCTTGAAATCAA10.5586592178770949No Hit
GGTGTGAGGATCCCCATGTGCTGAATCCATTTTAATGTGCAAATCCCTCC10.5586592178770949No Hit
TGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAGTACCTGTCTC10.5586592178770949Clontech Universal Primer Mix Long (95% over 21bp)
TTGTTGCCCAGGCTTGTCTCAAACTCCTGGCTTCAAGGGATCCTCCCACC10.5586592178770949No Hit
CGTTAATAGCATCAGCTAAAAATGTAAGATTTTTTTTGAAGAAGCTTTTA10.5586592178770949No Hit
GCCGTGAGCACCCTGTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGC10.5586592178770949No Hit
CTTTTAAGTTTTGTTTTTTGGCTCAGCCTGTCAGTTAACTGATAATCATG10.5586592178770949No Hit
GGTTACCACTGCCACCTTCTCCATCGGCTCCACTGGCCTCGTGGTGTATG10.5586592178770949No Hit
GAGTTTTGCCGTGTTGTCCAGACTGGTCTTGAACTCCTGAGCTCAAACTA10.5586592178770949No Hit
ATCTTCTCTATTCTTTTCTTCGCCTTCCCGTACTTCTGTCTTCCAGTTTT10.5586592178770949No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGGTGGGGGCCGGG10.5586592178770949No Hit
GCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGTATTCCGCC10.5586592178770949No Hit
GCAGAGTACTTGGCAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG10.5586592178770949Clontech Universal Primer Mix Long (96% over 27bp)
TCACTGTCTTTAATCACCATCAGCACTGGGGTGTCTAAACCTGTCATTGT10.5586592178770949No Hit
CCATTCTCCTGCCTCAGCCTCCCCCACAGCTGGGACTACAGGCGCCTGCC10.5586592178770949No Hit
CCACATGAGCCAGAAACACACGGAGATGGTTCTGGAGATGAGCATTGGGG10.5586592178770949No Hit
TTTATTTAATTCTCAGTGGATTTGAAGGAACATATCAGGGAATCCAAAGC10.5586592178770949No Hit
CTTATGAAGACACAACTTGAAGGGGGGATTGAAGTTCTCCAGCTCCTGGA10.5586592178770949No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACTATGCGTTTATACC10.5586592178770949No Hit
AAATTTGATTTCAGGAACTATGTAAGGTGCGTTGACTTTTCTGAAACTCT10.5586592178770949No Hit
CTGGGGCCCTGGGCCCAGCCCAGAAAACCATTTTTTCATCCTACATCTCC10.5586592178770949No Hit
ACTGACCCTGCTCACCGGAGGCGTCCTAGATGTAGTAGAGCGGCACCTCG10.5586592178770949No Hit
GATGGAAGGTCATGTGCAAATCCTGGGCTTACCCACCCATCCGACCCCTA10.5586592178770949No Hit
GCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTC10.5586592178770949No Hit
TCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGA10.5586592178770949No Hit
TGTCCAACCTTCTCACTCTGTGTATCTTGCCTGCCCTTCAGCCTGTCTCT10.5586592178770949No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
CTTTGGAGGTGACCCAGGAGAGAAGGGATGAAGGCCTTTGGTCCTCCACA10.5586592178770949No Hit
AGTCTGAGGATGCTGCAGATTTCATTTGGCGGTACCATCACTTTTCAGTT10.5586592178770949No Hit
CCAGGGCTTCTGTCTGAGCTGTGACCCCAAAGTTGCTGTTGACAACTGAC10.5586592178770949No Hit
ATGTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCATGCCCAG10.5586592178770949No Hit
GTGCAATGGCACGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAG10.5586592178770949No Hit
TTTTTAATAGAGATAGGGCTTCACCATGTTGGCCTCGATCTCCTGATCTC10.5586592178770949No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACACTGCGT10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
TTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCG10.5586592178770949No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG10.5586592178770949No Hit
GGCGCGATCTTGGCTCACTGCAAGCTCTACCTCCTGGGTTCACACCATTC10.5586592178770949No Hit
TCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTG10.5586592178770949No Hit
ACTCAAGAGGCTGAAGTGGGAGAATCGCTTGAACCTGGGAGGCAGAGGTT10.5586592178770949No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT10.5586592178770949No Hit
CTTAAAAAGCTTAAAGTTTAGTTTAAAAGATGAAGGTGATTAAAATAATT10.5586592178770949No Hit
GTCTCGCTCCGTCGCCCAGGCTGGAGTGCAGCGGTGCGATCTCGGCTCAC10.5586592178770949No Hit
CTGCATAGCTGTGGTGGCCTCATCCACGGACAGAGCAGGGTAGGCCAGGC10.5586592178770949No Hit
ATTTGTTTAATACTTTTCGCTCCGACATCTTTGCCTTCTGATCACCTCGC10.5586592178770949No Hit
TCCTCTCTTCACCTAGAACAACGCTTAATTTAATGTCATAGATTTGTTCT10.5586592178770949No Hit
GGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAATTAAAACA10.5586592178770949Clontech Universal Primer Mix Long (95% over 21bp)
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
AATCAGATGAGAAGGCGGCGGTTGCAGGCAAGAAGCCTGTGGTAGGTAAG10.5586592178770949No Hit
CCCGCTTCTTTGCACGAATGTCCGTTTCCAGCTCTGCGGCTCTGATGTAA10.5586592178770949No Hit
ATTCAAGACCTTTTATCTATGAAAAAGACTCTGCGAAGGGTATGAACCTG10.5586592178770949No Hit
TTCCACTTCTAGGCTCCATTCTGCAGCATCTGTTGTGGATTCCAAAATAT10.5586592178770949No Hit
GGCTGGGACCCTCAGTCAGGCCTACATAGGCATATGTGTTGTACTTCTTC10.5586592178770949No Hit
GTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTG10.5586592178770949No Hit
CCTTGTAGGTCACATTCTTCATGGTCCAGTTTTGGATGCCATCCGTCCAA10.5586592178770949No Hit
GAGCCATGTGGCTGTGCCCTCTGGCCCTCAACCTCATCTTGATGGCAGCC10.5586592178770949No Hit
ACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGGA10.5586592178770949No Hit
AGACTGAAATTCTGATTTCTTAGTTGTGCTTTTTGTGCTACAGAGACTAT10.5586592178770949No Hit
CTTATTTACAAATGTGTTGATGATTTCTAAATGTTTAGAGATTTTCCAGC10.5586592178770949No Hit
GGCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAAC10.5586592178770949No Hit
CTTAGAAGTCTCTGTCCCACCTGGTGCTCTGGGCAGCTGGGTGGCGCAGA10.5586592178770949No Hit
GAGCTGAGTCCCAAGGTGGCGGTCAGCCGGCAGGGCACGGTGGCCGGCTA10.5586592178770949No Hit
CAGATGGTCAGTCGGGAGTACAGGCAGTTCCTGTCATTCCACTGCCCATC10.5586592178770949No Hit

[WARN]Adapter Content

Adapter graph