FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACCAGGATGACTGCAGCCCGGACATTCCCATATGAACAAAAAGCTGGT42.2346368715083798No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG42.2346368715083798No Hit
TCAATGCCAGCTTCTACCGCCGCAGCCTGGATAACCACGGTTATGTCTTC31.675977653631285No Hit
CTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCT31.675977653631285No Hit
GTCCACACATAGTCCACCTGCCCTCCCTGCGTAAGATAAGCTCTTCCTCC31.675977653631285No Hit
GGATGGGCTGAGCAGGTCTGTTGTCCCATCGGGTCGAAGAAATTTGACCC31.675977653631285No Hit
GCTTAATTGGACAGTGGATCTCTCGGGTCCCTGTGGGCTGTGCGCTTGTA21.1173184357541899No Hit
CTCCAAGGTGGGCAAACTGACCCTCAAGACCACAGAGATGGAGACCATCT21.1173184357541899No Hit
TCATCAAGGATATTGGTCTAAAATTCTCTTTTTTTGGTTGTGTCTCTGCC21.1173184357541899No Hit
CATCCTAGGAGACAAGATACTAGAAGCTTAAGTGAAGGGTGCTTAGTCAG21.1173184357541899No Hit
TCTCTACTAAAAATACAAAAAATTGGCCGGGTTAGGCCGGGCGCGGTGGC21.1173184357541899No Hit
ACACCAGAAACTGGGTAGCTTATAAAGAATAAAAGTTGTTGTTGTTTTTT21.1173184357541899No Hit
GAAATGCTGCTAGACCGCAGGGTGAGCACATGAAATCCTAACCCGGAGTG21.1173184357541899No Hit
AGTCTAAGGAAACAAAACCTTCCAATATATTAAGAAATAAATCCAGTTAC21.1173184357541899No Hit
CCTGCTGGGTCCCTGATTGGTTCCCAGTGCAAGTCATTGTCTTTCTCCCT21.1173184357541899No Hit
ATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCAT21.1173184357541899No Hit
GGAAATGCCTGCCTGGCAGTGGACAAACACCCTTCCTCCAGCATTCTTGA21.1173184357541899No Hit
CACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCA21.1173184357541899No Hit
AAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT21.1173184357541899Clontech Universal Primer Mix Long (95% over 21bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAT21.1173184357541899No Hit
GCCTGACAGCAGGCGGAACAGACCTTAAGAGGGAGCTGCACCCCCCAGCC21.1173184357541899No Hit
GTATGGCTGCGACGTGGGGCCGGACGGGCGCTTCCTCCGCGGGTACCAGC21.1173184357541899No Hit
AGGTGGTTCTTTACAAAGCAGAGATTTCAGAAACCCTACATCCACAATAA21.1173184357541899No Hit
GTCTTTGAGTCTTCCAAAATGGATTTCATTTTGTCTCATGCCGTGTACCT21.1173184357541899No Hit
GTACATGGGGAAGTCAGGCACGTAGCTCAGCGGCGGCCGCGGCGCGTGCG21.1173184357541899No Hit
CAGCAACCCACTCAAATTCACAAAACAATTTTGTTTACATTCACAGTTTT21.1173184357541899No Hit
CTTTCTGCGGTTGCGCTTGCAGAGCGCCGCAGAAAGATGAAGCCGTGATG21.1173184357541899No Hit
TTTTGTACCAAGGAAGGTTAGGTGAAAAAAAAGATTTATTTTTTTTTGTA21.1173184357541899No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG21.1173184357541899No Hit
GGCTCTCACTAGAAAAGTCCACAACTTCCAGATGGAATGCTCTCTGCAGG10.5586592178770949No Hit
GTCATGGAAGGTGCTCTTCCAGGAACCTCTGTGATGGAGGTCACAGCCAC10.5586592178770949No Hit
GGTCATGGGAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCG10.5586592178770949No Hit
CTGTTGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAAGCT10.5586592178770949No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG10.5586592178770949No Hit
TCATTTGCTTCTGTTCATGTTTTCTTGAACACGTCTTCAATTTTCCTTCC10.5586592178770949No Hit
GGACAGGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCT10.5586592178770949No Hit
AAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGC10.5586592178770949No Hit
GGCTATGGATTCTTTCCCTTTCAAAACTTAAAACAGTTCCATTTTTCTAG10.5586592178770949No Hit
ATATTTCTTCAGATTCTGATTTACTCAGATCTAGACAGTACTTTCAACAC10.5586592178770949No Hit
TTCGTACAGGGAGGAATTTGAAGTAGATAGAAACCGACCTGGATTACTCC10.5586592178770949No Hit
CTCCAGGAAAGTTGCCCGCTGTGCTGTGCCGCCCCGGGTAGATCAAAGAC10.5586592178770949No Hit
CTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCAGGCGGA10.5586592178770949No Hit
GGTTTCGCCTGATTTCAAAGGAATACGAAACTCCCCAAAAAGGTTAAGAA10.5586592178770949No Hit
GTACATGGGAAGTGGTATCAACGCAAAAAAAAAAAAAAAAACAAAAAAAA10.5586592178770949No Hit
CCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCA10.5586592178770949No Hit
GCCCCTATAGAACCAACAAATATGGAGAGTATTATCTCCTTCTCTTGCCT10.5586592178770949No Hit
GGTCAGTGCTGGTACCGCCTGCTCCTCCCTCCTCCCCCATCACTGTGAAA10.5586592178770949No Hit
AGTTTATGCAGCAGGCTTCTTCTCCTCTGTAGTAGGTTTCTTCTCTGCAG10.5586592178770949No Hit
ATTTAGCAGCTGATTTTATGCAGTTTTGAAGCGAGACAATTTCATGTACG10.5586592178770949No Hit
GGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCG10.5586592178770949No Hit
CCGCCTGTCCCCGCCGGCGGGGACAGGCGGGGGACCGCGGAGCCTCGGTT10.5586592178770949No Hit
CACGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC10.5586592178770949No Hit
GATTCTTCCAAGGCAAAAGAGGTAAGCAGATCACACCTCTTTCTGCCTCT10.5586592178770949No Hit
GGACAAAAGCGAAGACCAGGCTGGGCTCCCAGAGAGCCTCCCCGAAAATC10.5586592178770949No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTAACAAGGGGTACCA10.5586592178770949No Hit
GTACTTTTTTTTTTTTTTTTTGCGTTGATACCACTGCTTCCCACTGTCTC10.5586592178770949Clontech Universal Primer Mix Long (95% over 21bp)
GTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTGCCCACTCCCA10.5586592178770949No Hit
GGGCAATGGCACCAGCACGGGCAGCAGCTGGCACCTTATTGGCCAGCAAC10.5586592178770949No Hit
CTGCAGCACTTTAAAGGACGGTGTCTTTTTCTGGACAGCTGAGTTCTCAT10.5586592178770949No Hit
CCTGCCGCTGGTTCAGGACTTTCAGCTCCTGGAGGTTCTCCAGCACCTCC10.5586592178770949No Hit
TCTGGCCTCCATGAGGTAACTGTTTATCTTGTCAAAGGCCACTTTGTGAC10.5586592178770949No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10.5586592178770949Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTACATGGGGAGGAGAGGAGAGCATAGCACCTGCAGCAAGATGGATGTGG10.5586592178770949No Hit
TTTCTAATCAGCAAAGCGTTCAAGAGGAGGCAGAGAATAAAAGCTTAACA10.5586592178770949No Hit
AGCGAGAACCAACCCTTTGCGCGATTCTGACCCAATTCAGCGGTTCCTGC10.5586592178770949No Hit
ATTCCCCATTCCTCTCCCCTATTGCTGGCTCTGCAGGGCTCTGATCAAGC10.5586592178770949No Hit
ATCTCAGGTGTAACCCCCATCTCTACTAAAAGTACAAAATTTGCTGGGCG10.5586592178770949No Hit
ATTCCCCGTTCCTCTCCCCTATTGCTGGCTCTGCAGGGCTCTGATCAAGC10.5586592178770949No Hit
GCCCCTCTCCACCTTCTTTCTCCCGCTGAATCATTTCCCTCAAAGCCCAA10.5586592178770949No Hit
TCATTAAACAAACCTAAATAAAGAATTAAAATCATACAAAGTATATTCTT10.5586592178770949No Hit
GCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAG10.5586592178770949No Hit
ATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCA10.5586592178770949No Hit
CCGACACACGGAGGAGACATCAATGATATCAAGAAGGCGCGACTGCTCCT10.5586592178770949No Hit
CTATAATTTTAACACTACCAATTCTTGATTTAAATTGTGCAGTACTGCTA10.5586592178770949No Hit
TGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGA10.5586592178770949No Hit
AGAAACAGCTCAGCTGAATTTCTATAGGCTGAAAAGGAAATCCATCAATA10.5586592178770949No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
TTGTGATGTTATCAACATCAAGTAAAATGCTCATTTTCATCATTTGCTTC10.5586592178770949No Hit
CCACTTCACTTATTTACATAGCTGGCATCTGAGTTTGAAAACCCTAATCT10.5586592178770949No Hit
CCATAAGGTTCTCCACCCAGTAGGCATCCCGCTCACTGGGTGGAGAACCT10.5586592178770949No Hit
AAACGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGG10.5586592178770949No Hit
GGTATAGAAGGAACACACCTCCATAGAATTAAGGCCATATACAACCAAAC10.5586592178770949No Hit
AAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA10.5586592178770949Clontech Universal Primer Mix Long (95% over 21bp)
CTTCTTTTACTACCTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTC10.5586592178770949No Hit
GCAGAGTACATGGGGCTTTTTCACCCATTCCCTCAATCCTGCCCAGAGTT10.5586592178770949No Hit
GTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCA10.5586592178770949No Hit
ATAAAAAACATATTATCTCCTGTCCACTTAAAGACCTCAAACTCCGGACA10.5586592178770949No Hit
GAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCA10.5586592178770949Clontech SMARTer II A Oligonucleotide (100% over 25bp)
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTTT10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
ACATTTCCCATTATGTTGACTTTGCTAATGCTACATCTGCATTTCTTCTT10.5586592178770949No Hit
TCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCCTATTAGTGG10.5586592178770949No Hit
ATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATG10.5586592178770949No Hit
CACAGTACCTTTAGTGTGGTGGTCAGCTCCTCTTCCGTCAGCACCTCCTC10.5586592178770949No Hit
TCAACGCAGAGTACATGGGATGACGCAGGGAGAATTGCGTCATTTAAAGC10.5586592178770949No Hit
CTCCTAAAAACAGCCAAGTGGTTTGATTCTTAGAAACCAGAAATGCACAA10.5586592178770949No Hit
GAGTGAAGCAGGCCAGCCCCCACATGGCCCCCGTGCCTCTTCTCGGGCTC10.5586592178770949No Hit
GTTGCAATGTAAGGGAAGAAAACCACCCTGGAGCATAATGCTTAAGTATT10.5586592178770949No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT10.5586592178770949No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTAAAAATGTTGAAC10.5586592178770949No Hit
GGTAAGAATAGTTAAAAGAGGGCTGGGCGCGGTGGCTCACACTTGTAATC10.5586592178770949No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTAT10.5586592178770949Clontech SMARTer II A Oligonucleotide (100% over 25bp)
TTTCAGTCCTGTGAAATAGATACTATTGTCATTCCAATTTTAAGATGGGA10.5586592178770949No Hit
GAGTCTAAGAGGCAGGCCCAGAGATCCTCTGCTTCTGAGAGTGAAACGGA10.5586592178770949No Hit
TTGTAGACCACAGTCACACACTGCTGTAGTCTTCCCCCATCCTCATTCCC10.5586592178770949No Hit
ACGCAGAGTACATGGGTGGTTTCCCCCATCCTGTCCTCATGATAGTGAGT10.5586592178770949No Hit
AAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGCAT10.5586592178770949No Hit
GTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGA10.5586592178770949No Hit
TTCATGTTTAGGGATTCAGGATCCTCTACTATTCTCTTCATAAACAGGTC10.5586592178770949No Hit
GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG10.5586592178770949Clontech SMARTer II A Oligonucleotide (100% over 23bp)
ATGTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCATGCCCAG10.5586592178770949No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT10.5586592178770949No Hit
GGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGA10.5586592178770949No Hit
GTGCTGGGATTACAGGTGTGAGCCACTGCACCTGTAATCCCAGCACTTTG10.5586592178770949No Hit
GTTTCCAGTTTCGTTTCCCCGGGACCTCTTGCCCCAATTCCTCCGCCTTG10.5586592178770949No Hit
TCTACTAAAAATAAAAATAAAAACAAAATTGGCTGGGCGCGGTGGCTCAC10.5586592178770949No Hit
AACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGC10.5586592178770949No Hit
GTACAAGGGAAGCATTTGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10.5586592178770949No Hit
GATTACAGGCGTTCGCCACCATACCCGGCTAATTTTTTGTATTTTTAGTA10.5586592178770949No Hit
ATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGTCAAATTA10.5586592178770949No Hit
TATCAACGCAGAGTACATGGGGGACTCCACTGCGACTGCAGAACTCAGAG10.5586592178770949No Hit
GTGAAGAGCTGGAACGGATTGATCCTCCGAAAACCCATAGATATGGAGAA10.5586592178770949No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT10.5586592178770949No Hit
CATGAAGATAGCTCCAGAGAGCATCCCCAGTCTTGAGGCTCTCACTAGAA10.5586592178770949No Hit
ACACGTGGCAGACCAGGTCCAGCTCCGGCGCGGCGCGGTGGATGGCCTCG10.5586592178770949No Hit
CAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATGCCA10.5586592178770949No Hit
GGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCC10.5586592178770949No Hit
TGGAGAAGATGCCCCAGATCTTCTGAAAGTCATCACTAAGCCCTTCACAA10.5586592178770949No Hit
CTCCAGGGATACCAGGGGCTCCAGGCAGCCCATCATTTCCAGGAGGACAT10.5586592178770949No Hit
TTTTTCGTCAGCGTATAGTAAATGCGTTAACTAGGCTTTAAATGACGCAA10.5586592178770949No Hit
GTTCTTGCTGGTGGCGATGGCTGGGTTGGGGGAGAGAAAAGACTAAAAGA10.5586592178770949No Hit
GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCC10.5586592178770949Clontech Universal Primer Mix Long (96% over 26bp)
CTCTTTGGAAAAGCCAATACTTTCCTTGTTTTTGTTTCTGAGACAGAGTC10.5586592178770949No Hit
GGTGATGGGGGTGGGGGGATCAAAAAAAAAAAATAATATAAATTATAAAA10.5586592178770949No Hit
CACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAA10.5586592178770949No Hit
TGCCTATGTAGGCCTGACTGAGGGTCCCAGCCCTGGAGACTTCCGCTACT10.5586592178770949No Hit
NTGTTTAATTGAGAAATAAACATTTGTGTACAAAATGCTAATTTGTGTGT10.5586592178770949No Hit
GGCCTACAGAGATGCCTGCTCTGCTAATGGGCTGGACAAGATTAAAAGGA10.5586592178770949No Hit
CTCCACGACTTTAGACATCAAATCCTGCAGACAAGGGGAGCCCTCAGTCT10.5586592178770949No Hit
ACTTGGATGCTAGTTAAACTTGAGTTTTCAAGAAGCACCCTTTCAATTAT10.5586592178770949No Hit
TCTCTACCCAAAGAGAAGTCAACATAGTCTCTGTAGCACAAAAAGCACAA10.5586592178770949No Hit
GCTGAAGGGCAGGCAAGATACACAGAGTGAGAAGGTTGGACACTGTCTCT10.5586592178770949No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTGGGTTTAAACAACGGGTGCCC10.5586592178770949No Hit

[OK]Adapter Content

Adapter graph