FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659933

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659933
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCAGGGCTGCAGTCACATCCGCGGGCGTGGCAGGTCCTGAGTCAGGGC211.11111111111111No Hit
GCCCAGTGCTTAGAACACTATGAATTTCTTCTGGATAAAGCTGCCCAAAG211.11111111111111No Hit
CTTGTACTTCTGTGTCTCCCGGTCCCAATACTCCGGCCCCTCCTGCTCCA15.555555555555555No Hit
CTTCTGCTCTGTTCAAGCCTTGAGGGTCAAGAAAACTCTTTCACAATCAA15.555555555555555No Hit
TCATTGTAATCTCCAATAGAGATTACAATAGAGATCTCCAACATGATTTC15.555555555555555No Hit
TCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCC15.555555555555555No Hit
GTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGT15.555555555555555No Hit
ACAGTGACCGCAGCCCACTTCCCCACATCCTTAATCAGAGCCTCATGCAG15.555555555555555No Hit
CAGCTACAGGGTGACCAACGCAAGAACATATGCCAGTTCCTCGTAGAGAT15.555555555555555No Hit
GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT15.555555555555555No Hit
CACCTGCGCTGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCAT15.555555555555555No Hit
GAAGTAGAGCTTCTCAAACATAATATCATTACCTCATAAGCATTAACAAA15.555555555555555No Hit
GCTGGCGCTCGTGCCACTCTGCTGGTTCGCCAACATTGTCGTCCGCGAGT15.555555555555555No Hit
TTCCTGTTTCATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTTAGGA15.555555555555555No Hit
ACCGTGGGCTACGTGGACGACACGCTGTTCGTGAGGTTCGACAGCGACGC15.555555555555555No Hit
GAACCATTGAAGAAGCTCCGGCAGATATGGATGAAGTCAGCTTCGTACAG15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)