FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length140
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTTTTCTTTAAAGGGGTTCTTGTCTTCTGGAATTCCCTTTACTAGAG211.11111111111111No Hit
CTTTTTAGTAAATTCAGAAACACCACTAGTTTGAAGAATAGCTGATGGTA211.11111111111111No Hit
ACGCAGAGTACATGGGAGATTCTCCCCAGACGCCGAGATGCGGGTCATGG15.555555555555555No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA15.555555555555555No Hit
AGACTAGACAGCATGGCTCTTTTCAGTTTATTGCATGAAGGAGTTACACT15.555555555555555No Hit
GGGAGGTCCAGGCCAAGTCACTGGTCCCTGGGCTCGGGCCCTGCCGATGG15.555555555555555No Hit
TGCCAGTAGCTTGCTTACGACCTTGGGCAAGTCACTTTTTCCTCTCTGGG15.555555555555555No Hit
GAACAAGCCAGGGCCATGGGGACGGGGGAAGTTTTCACTTGGAGATGGAC15.555555555555555No Hit
GCCTCATAGCAGTCGCGGACGGTGCCGAAGTACACGTAGTACTGGTCGTT15.555555555555555No Hit
ACCTGGTACTCTGCAGTGGTTTTCTCTTTGTTGTTCACAATCACAGTACA15.555555555555555No Hit
ATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCCGTTCTTA15.555555555555555No Hit
ATCCGAGCTTGATCCCCCTCTTTGTATTTATTGGAACTGGAGCTACTGGA15.555555555555555No Hit
GGGTAGAAGCCCAGGGCCCAGCACCTCAGGGTGGCCTCATGGTCAGAGAT15.555555555555555No Hit
GTCTCCGACTGCCTGGCCGATTGCCAGCACAACCTGATCGGTCTTCATGG15.555555555555555No Hit
ACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCAT15.555555555555555No Hit
CTGGTAATCCATTTGGATCTACAGAATACTTGTTTGGAACAGAATCTGAT15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)