FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCAGAAAGCACGTCCTTGTGGCCATTGTCCTGAGGAGTGGATTACAT28.0No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT28.0No Hit
CTGGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC28.0No Hit
GGCTCAGAGGGGACCTGTAGAAGGTATACACAACCTGAGGTCCTCACAGA14.0No Hit
CTCAGAGACTCTTCACAGCCTTGTTTCCCTTTGAGAAGAATTGTGGCAAT14.0No Hit
ATGAGGTATTTCTTCACATCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCG14.0No Hit
ATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCG14.0No Hit
ATTTTGAGGCAAATTGTGCCATAAGCAGATTTTAAGTGGCTAAACAAAGT14.0No Hit
TCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGG14.0No Hit
TACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATC14.0No Hit
ATGCAGTGTCCAGTCATGACCTCGATCCATCGCGTATAGGGACGCCCCCT14.0No Hit
CGTCCGACTTCACTGCCCCCTTTCAGCCTTTTGGGTCCTGTATCCCAATT14.0No Hit
GTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAATTCCTGAC14.0No Hit
CAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCC14.0No Hit
GACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAG14.0No Hit
ATGCTTATGATTGTCATCGTTACAGCCGGCGAAGAAGAAGCAGGTTTCTT14.0No Hit
ATCTGGGAGAGACGCGGGGCTGCGGGTCCACAGCTGCCCAGAGAGGGCTC14.0No Hit
TTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATA14.0No Hit
GTAGTTAGGTCAAGTGGATGGTTCTGTACCAAGGACACAGCAAAGGTCCT14.0No Hit
CCCAGTGAGGCAAGACCGAAGTAAACTACACTCAGCTCGTCGACCTGCAC14.0No Hit
GTAAAGGGATCCAACTATCTTCTGGCTGAGGGGTCACATGACTTGCTTTT14.0No Hit
TCTGGGTTTCATCCATCCGACAATGAAGTTGACTTACTGAAGAATGGAGA14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)