FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTTCAACCGCCTGACGAGTGCTGACAGCTATGAAGAAGACCTCCTGTT28.0No Hit
ACCATTTATTGTCACCCATGGATGATGACTGCTGTTACGAAACACACCAA28.0No Hit
GGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGA28.0No Hit
GGAAGAAGAAGGTGACCTGTGTCCTGTAGGAGTCCTCACCATCATTTCTT14.0No Hit
GATGACTGGGGAGGAAACACAGGTCAGCATGGGAACAGGGGTCACAGTGG14.0No Hit
GTGAAAGGCATCTCAGCGGCTGCCCCACCATGGCTACCTGGGCCCTCCTG14.0No Hit
TGGGTGTACCAATGCCCCTCATCTCCCACTTTCACACCTAACCCTGACTC14.0No Hit
TATAGAACCAGACCTAGATCTTCTGAGTGAAGCTGATCTTGATCTACGAA14.0No Hit
GCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGA14.0No Hit
CAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGG14.0No Hit
GTTGTAGGTCGGGGGCACCACACCACGCTCGCTTGGCAGTAACGCGAGCA14.0No Hit
GCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTCATCCAATC14.0No Hit
CCTGGAGCCCTCTCTGGGCAGCTGTGGACCCGCAGCCCCGCGTCTCTCCC14.0No Hit
GATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGA14.0No Hit
CCTCTGGACGGTGTGAGAACCGGCCTCGCTCTGGTTGTAGTAGCCGCGCA14.0No Hit
GTGAAGACCTTGTACAGAATGTGTTAAATTTCTTGTACAAAATTGTTTAT14.0No Hit
CACCAGGACCATCCAGGACACACTCAATCCCAAGTGGAATTTTAACTGCC14.0No Hit
GGTGTCCACTATGTAGCTGGAACAGGAGGCCTAGGACCAGCCTGATGCAG14.0No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA14.0No Hit
GTCCTTACAAGTCCGCTCCTCGGAGAGCTTGATTGATAATTCTGTATAAG14.0No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTA14.0No Hit
GGGTGGGCGTCGTCCCCGTTCACGCAGATCTTGCTGAACATATCGAATTT14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)