FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003659961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATTGATGCATTCTGGGCAGCCAACCTCGACCTGGCCTCCATCACCCCG35.172413793103448No Hit
TTTAATGGTCTGTGCTTTAAATGGTAACGCTACGGCCCCAGGTCACTGCG23.4482758620689653No Hit
GTGTGCAGCACCATTGAGAACGTCATGGCCACCACGCTGCCAGGGCTCCT23.4482758620689653No Hit
AGCCGGATCCCCGCCCGTACCATATCCTGGTCATAGGCCAGCACGAGCCG23.4482758620689653No Hit
GGCCAGAGAAGAGTCAAGGGCACGAGCATCGGCCATGCCTTTCTTGGACA23.4482758620689653No Hit
CTGTAGGACAGTGGGTGCAGCCACGGTGTGTGAGGCACCCAGGATTTGCA11.7241379310344827No Hit
CTTTGGAGTCCGGTGAGGCGATGCTGACGAGCGACACAACGGTGACTTGG11.7241379310344827No Hit
GGTCAGGAGTTTGAGACCAGACTGGCCAACATGGTGAAACCCCATCTCTA11.7241379310344827No Hit
AGGCTGCAGTGAGTCATGATCATGCCACTGCACTCCAGCCCGAGTGACAG11.7241379310344827No Hit
GATCCCGCTGCCCACCGAACGCAAGGCAGAAGGCCTGCGCGACCTGCCGG11.7241379310344827No Hit
CCGTCGAGTCGGTCCGCGCCGACGGCCGGCGGTTCGACGGGATCGACCGC11.7241379310344827No Hit
GTTTTCTACAAACATTTTCACCCCGCGATCGCGAGGCAAACCAAATCGAA11.7241379310344827No Hit
CACTGCAAGCTCCGCCTGGCGGGTTCATGCCATTCTCCTACCTCAGCCTC11.7241379310344827No Hit
GTCTAAGATACCCCTGATCAAGAAGGCCACTGGTGTGCAGGTGTGAGGCT11.7241379310344827No Hit
CAGGAGAACGAGGGACGAGCCCCAGAAGAAAGTTCTCCACCTCCCTCGCC11.7241379310344827No Hit
ATTCCGAGCCGATGAACCACGTCTGAGCCGTGGCGATCGGGTGATCCACC11.7241379310344827No Hit
ACCGATTCGACGCTGACCAAGGCGCAGTGCCATAAGCTGGCGGGGGTCGG11.7241379310344827No Hit
GTAGTAATCACGCAACGATACGACGACCAAGTTCTCGATATCACCCAGTC11.7241379310344827No Hit
CCCTTATATTGTCCAGGCTGGTCTCAAACTCCCGGGCTCAAGTGATCCTC11.7241379310344827No Hit
GTCCTGCACCGAGCCGCGGTCCTGGTGGGCGGCGGCCAGGCGGCCGCGCA11.7241379310344827No Hit
AGTGAAGCAAGGCCTGTTAGCGCCGCAGGAAACTAAGCTGCCGCGGAGCA11.7241379310344827No Hit
GGGTCAAGCTTCACCCTTCCCTGCCCCCGATGCATATTGGCAGAGGCGGT11.7241379310344827No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT11.7241379310344827No Hit
GGACTCGTCACTATCGCCACAACTGTCGATGACGACGTCATCATCTCTTC11.7241379310344827No Hit
GTACATACATACCACATTTTCTTTATCCAATCCACCACTGATGGGACCCT11.7241379310344827No Hit
TGCCAAGCGAGCGTGGTGTGGTGCCCCCGACCTACAACTTGCGCCAATTA11.7241379310344827No Hit
ACCCAGGGAAAGGTTAAAGACTTTGGAGAACAAGAAAGAGAGGGCAGAAA11.7241379310344827No Hit
ATCTTCTCACGGTACTCTTTGCCCATCTGCTGCTTCTTCTCATTCCTCTC11.7241379310344827No Hit
ATGCCATGCTTTTGAAAAAGAATGGATAGAATGTGCACATGGAATCGGTT11.7241379310344827No Hit
AGCATCGGCCATGCCTTTCTTGGACATCCAGAAAAGGTTCGGCCTTAACA11.7241379310344827No Hit
CATTCGATCTGCACCGACATCAGGCCTAGGCATTGAGAAAAGATCGTCGC11.7241379310344827No Hit
CCAAATGTCTGAACCTGCGGTTCCTCTCGTACTGAGCAGGATTACCATGG11.7241379310344827No Hit
TTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACT11.7241379310344827No Hit
GTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACA11.7241379310344827No Hit
AGAGGTGCCAGCCGAGAAGGTCGAATCAGCCCTCCCGCTGTCCCACAATG11.7241379310344827No Hit
GTCTCAGCAGGTCTGAAATGTGGCTGTGGGAAGTTGCCATTTTGGGAAGG11.7241379310344827No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA11.7241379310344827No Hit
CTGTAGGACAGTGGGTGCAGCCACGGTGGGTGAGCCACCCGGCTTTTGCA11.7241379310344827No Hit
AACTGAAGCTCCTGCTCCTTCACGGATGCTAGAATAGTGGTGGCTGTGGT11.7241379310344827No Hit
GATGGGGAATCTATCTGTGGAAATTCCCCTCTTGAAAGATCAAAGCAACC11.7241379310344827No Hit
CCCTGCCAACGCAGAGCCACCACTGCGCGCTTAGAATCGAACACCCATTT11.7241379310344827No Hit
GTCATGGGTTTTCCCTTCTGGCCGACACATAATATCGGTCCGATTTGGTC11.7241379310344827No Hit
AACAAAAGCAATCGCCCGTCCGTACAAACGTCTGCACCATGGCCCAAAGT11.7241379310344827No Hit
GCGCCCAAGGGCGTGCCGCCGGCCGTCATCGCGAAGCTCAACGGCGCGCT11.7241379310344827No Hit
GCTTCTCAGGAACCTGGTCTCCTACTTGAAACAGAAGCAGGCCGCAGGGG11.7241379310344827No Hit
TTTCTGTTCCTTCTCTCAGATTCCAGGATGGAGGCTGGGATCATGGAGTC11.7241379310344827No Hit
GGTTGTTTACGACAAACCTCCTTGTCAAAGTGTGTAAAAATAAAGGATTG11.7241379310344827No Hit
GATTGAAGATGACCCATCCCGTCCGGTGCGCATCATCACCGTACGCGGAC11.7241379310344827No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC11.7241379310344827No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTACAACAGGTT11.7241379310344827No Hit
CGATGGAAGAAGCCGTGGGTGCCTTCATCGTCAGTGCGTTGCTCATCGTG11.7241379310344827No Hit
CTGTAGGACAGTGGGTGCAGCCACGGAGTGTGAGCCACCCGGGGTTTGGA11.7241379310344827No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)