FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003659998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003659998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCA210.0No Hit
GCTCCAACATGGCAAAAATCTCCAGCCCTACAGAGACTGAGCGGTGCATC210.0No Hit
ATCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGG210.0No Hit
GTGTGCAGCGGACGCTGATGAATCTGGGTGGGCTGGCAGTAGCCCGAGAT15.0No Hit
AGCTACCTCTTTCTGGGAGGTATCTTGATGTCAGCCCTGAGCTTGTTGCT15.0No Hit
GCTGCAGCGCGTCGAGCTTGCGCTCTTTGCTGCCGCCTTCCTGTGCGGGG15.0No Hit
GAAGTTAAGAATTACACAGAATTCTCATCTGAGAATTACAGATGAGAATT15.0No Hit
CCTCAGCCCTGGGCGCTGGGGCTCCTGCTCTTTCTCCTTCCTGGGAGCCT15.0No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG15.0No Hit
GTTGAGATGAATGTTTTTAATTTCCCCATATTCTGCGAATTTGTCGTGTA15.0No Hit
GGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACC15.0No Hit
GGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCT15.0No Hit
CTCTGGGATCCCTGGGATGCAAGCCCAGGGACAGCAGAGTCCCCAGGTGG15.0No Hit
CCCTTGAGTCACAGCTGAAGCAGCAGAGGACGCAGGTGATGGCCACAGTC15.0No Hit
GAAAAGAGAAAGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGC15.0No Hit
GCCCCACACAGCACACTAATGTGAGGGTGTAACACACATACTTCTAACTC15.0No Hit
CCCTGAGATGGGAGCCGTCTTCCCAGCCCACCATCCCCATCGTGGGCATC15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)