FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003660001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTTAGGAGATGCAGCCAAAACGACAAAGCTGGAGGCCTCTCCCTCTGA313.636363636363635No Hit
GAAGAGAGGAGGACTAATTCCCCTGGAAGGCTCCTTGGGCAGCAGATGAA313.636363636363635No Hit
TCTTCATACTCATTGTTATTTTCGGCAAAGAAATAGTAGAGACTGCATTG29.090909090909092No Hit
CCCTGGGAGGATCTGTCGGGCAACAGGTAGGTCTTCACATACGGATTGCA29.090909090909092No Hit
CTCCTGCCCCAGCCTCCCGAGTAGCTGGGACTACAGGTGCGCACCACCAT29.090909090909092No Hit
GTCTGCATCATTGTAATCGCGAATATCCTTCTTCTTCATCCGGGGAGGTG29.090909090909092No Hit
GGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGTATATGGTTAGT14.545454545454546No Hit
GTTGTGGGGAAGAGACTGATAATAAAGGTGGATGCGACAATGGATTTTAC14.545454545454546No Hit
CCACAGGACTCCATGCCCAGGAAGGAAGGCTGGAAGAGTGCCTCAGGGCA14.545454545454546No Hit
GAATAGGAAATATCATTCGGGCTTGATGTGGGGAGGGGTGTTTAAGGGGT14.545454545454546No Hit
CGGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCG14.545454545454546No Hit
GGTGGGATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACTCT14.545454545454546No Hit
GTCTCCTGCACAGCTGGGAACCACGATCTACAAGGAATTTGAAAAGAGGA14.545454545454546No Hit
GTACATGGGAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATCTCC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)