FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003660002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTACACTGGATAATCATTCCCTGGCCATATCAGTCATCATGATGGTG313.636363636363635No Hit
CTCCATGACTAACTAAAGTGGAATTGAGAGAGTATTCTATATTTGTAACT313.636363636363635No Hit
CTGCAACCTCTGCCTCCCAGGTTCAAAGGATTCTGCTGCCCCAGTCTCCC29.090909090909092No Hit
CAAAAACACTGCTAGGTCCTGAGGAAACAGAGATGAATAAATTACAGTCT29.090909090909092No Hit
GCAGAGTACATGGGGCAGCGAAAATGGCGGCTTCCAGGTGGGCGCGCAAG29.090909090909092No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT14.545454545454546No Hit
GTCCTCAAATTTCGCACTGACCATAATGTGATCCCTTCCGGCGGTCGGGA14.545454545454546No Hit
GCTCTTGCAATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTCCTCCTA14.545454545454546No Hit
CCACAGGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCC14.545454545454546No Hit
GGGTATGCCCTCCCCCATGCCATCCTGCGTCTGGACCTGGCTGGCCGGGA14.545454545454546No Hit
NCTCTTGCAATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTCCTCCTA14.545454545454546No Hit
GTATCAACGCAGAGTACATGGGATGACCCACCAATCACATGCCTATCATA14.545454545454546No Hit
CAGTTGTACTGCAAGACCAGTGTCAGGCACATAGGCTGATTAATCAGTGG14.545454545454546No Hit
GCAAAGATCAACCTCTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGAT14.545454545454546No Hit
ACCATGCACACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)