FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA32.307692307692308Clontech Universal Primer Mix Long (96% over 26bp)
GGTGAGCTGGCCGTTCTCGAATCCAGCCGCGATAACCGTAACGCGCACCT21.5384615384615385No Hit
TGCCAAAACGTATGTCGAATCACAGTGAACGGTCCGGCCCGTCCTTCTTG21.5384615384615385No Hit
GCTCTATCTATAGGAATGTTCAACTCTGTGAGTCGAATGCAATCATCACA21.5384615384615385No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT21.5384615384615385Clontech Universal Primer Mix Long (96% over 26bp)
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA21.5384615384615385Clontech SMARTer II A Oligonucleotide (100% over 25bp)
TCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGCGCTCTC21.5384615384615385No Hit
CTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGACTTCC21.5384615384615385No Hit
TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGA21.5384615384615385No Hit
CTGTGTAATCACATCTGAACACAGATAAAACATTGTCCAAGCCACGAAAA21.5384615384615385No Hit
GCCCCGGGGGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCAT21.5384615384615385No Hit
GATAAGACCATCGAAATCACCGAGGGCGATGACAAGGGCAAGACCGTCAC21.5384615384615385No Hit
GAGCATACACTCTGGCTCCGATTCTTCTAGCCATTGACACTGCATACTTG21.5384615384615385No Hit
GTACAGACATGTTCTTGTGGCGCTTCTCGAAGCGGTTGTACCTGTCTCTT21.5384615384615385No Hit
AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGT21.5384615384615385No Hit
ATCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTG21.5384615384615385No Hit
GGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTT21.5384615384615385No Hit
GCGCTGACGCGCTACCGCGATGACGGGCGCATCGAGATGGACAACAACGC21.5384615384615385No Hit
GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCC21.5384615384615385Clontech Universal Primer Mix Long (96% over 26bp)
CCACTCTTTAACCACTGCATTAATTTTTCCACCTGCCCTTCTTCACCGCA21.5384615384615385No Hit
GCGTCGATGCGAACCTGCTGCACACCAGCAGCGAAGGCACCGTGCTGGAG21.5384615384615385No Hit
GGCACAAGCCAAGGCAAGGAGTAAGGCATGGCAAAGCAAGGCAAGGCACA10.7692307692307693No Hit
GCCCGGTCGAAGTCGCCCGAGAGTTCCTCGAACGGTACTTCGACATTGAG10.7692307692307693No Hit
TCCTTGGCCTCAACCGTGGCCATCGAAGCGCGAGCGCCGTAAGCGAACTC10.7692307692307693No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG10.7692307692307693Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GACATGCCGGAATTGAGGTCTATGCAACTTCTTCCAGAGACCGTTCCTCG10.7692307692307693No Hit
TGCGGATGTAGTGCAGATAGTCTCGGCGGATGACAATGGTCCTCTGCATC10.7692307692307693No Hit
CGCTTTCCTCCGTGATCCGCATGGTGGAGGCGAATTCGGCAAAGCCTTCC10.7692307692307693No Hit
TCGTCGAGCCGGACGCGCTGTCGGCCATCAAGCTGACCCTGCTGGTGGCG10.7692307692307693No Hit
TTCAGACTGAGCGTGCCTACCAAAAGCAGCCGACCATCTTTCAAAACAAG10.7692307692307693No Hit
GCCGCGAGGTCTGTGTCTTCAGCCAGGATGTCACCGTCTTCGTCGGCAGC10.7692307692307693No Hit
TGCCTGCGCCAGCTGCATCAGGTAATTGTCCAGCCCTGCATCGGCCTGCA10.7692307692307693No Hit
GACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAG10.7692307692307693No Hit
CTCCGGAGCTGCCTGAAGTCGATGCTTCCAACACTCCTGCCGCTTCCAAG10.7692307692307693No Hit
GGGAGAGGATCAAGACAAATAACTAATAGGTACTAGGCCTAATACCTGGG10.7692307692307693No Hit
AGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGC10.7692307692307693No Hit
CTTGGTGGGGGAGGGTCTCAGTCATTTACAGTCTTGTGTTTCAACAACCT10.7692307692307693No Hit
GTTTGGAACCAAAGGTGTCAAGAGGGTGCTGTGTCCTATCAACTACCCCT10.7692307692307693No Hit
TGATGAGGGTGCACCCGATCCTGGTCTTCCTGGCCGTGATCATCGGAGGT10.7692307692307693No Hit
CCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAG10.7692307692307693No Hit
CGCCAGAGAGGATCCGCCCTCGAATGGACACATTACCAGTGAAGGGGCAT10.7692307692307693No Hit
GTGTAGCTTAACTTGTTTGTAATCCTATATGCCTGAAAACTGTTTCTCTA10.7692307692307693No Hit
GGCCAAATCCCGCCCATCCATGATAACCCAAGAGGCATAGAAAGGGTGAT10.7692307692307693No Hit
CTGACAACCTTCTCTAAACTTAAATCTTGGGACTTTACAACTCTGACTTG10.7692307692307693No Hit
TTCATTAATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTGTG10.7692307692307693No Hit
CGAGTCGACGAGGGACTCGATGACCTTGAGTAGTGGTCCGAGCTCGCCGG10.7692307692307693No Hit
CACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCT10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
ACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGCGCC10.7692307692307693No Hit
GCTTACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
CTGACAACCTTCTCTAAACTTAAATCTTGGGACTTTACAACTCTGACTAG10.7692307692307693No Hit
CTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTAGCCGACTTCC10.7692307692307693No Hit
CCCTTCTAAGATACCTTCTAAGCATTTTTTGCAGAAGTTGTGGGAGCAAG10.7692307692307693No Hit
GAGATAAGGAGATTAAAAATATGAAAACAAGGCCAGGAGCAATGAAGCCT10.7692307692307693No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
TACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
GCACTTCGCCGTCTCGCACTGCTGTTGCGGCGTGCCGCCGGCGAAGATAT10.7692307692307693No Hit
ATTAAAAGCTATGGGGAAAGTGGTTGAATATTCCTGAGGGATAAAGTGCT10.7692307692307693No Hit
CGCGTCGAGCGGTTGAGCAGGCGCACATTGAAGCGGGACTCGAGCGTCGC10.7692307692307693No Hit
CATCGACGATGTTCGGATAAGCGGAACAGCGGCAGAGATTGCCGCTCATC10.7692307692307693No Hit
GGCTTCGCGCGCCTTGCGGATCTCGTCTTCGAGGTTCCTGATGACCTCTT10.7692307692307693No Hit
GAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGCATCAACGCA10.7692307692307693Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GCCACGGTCTGTGTGGTGTGGAGAAAGGGACCACAGTCTGTGTGGTGTTG10.7692307692307693No Hit
ATCAAATGGAATCGAATGGAATCACCGAATAGTATCTAATGGAACAATCA10.7692307692307693No Hit
TTATTGGTGTTACTACACCGGAGACAGCTACTAAGACACACCCACGAAAC10.7692307692307693No Hit
TGGTGGCGGAGGTCGCCCCGGAGCTGATCTCCCGGCCGGCGATCGGTACG10.7692307692307693No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG10.7692307692307693No Hit
CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT10.7692307692307693Clontech Universal Primer Mix Long (100% over 23bp)
CAATCATGGATAACTATTTTAAGGCACTATTTAAAATAGCCAAAGTTCGC10.7692307692307693No Hit
GGTTTTTTCAACCTCTTGTATAATTCACACTTACTTAGCTTTTGATTGTT10.7692307692307693No Hit
GCTAAGACCATCAGAAAAGCACAGTATTCAGGCGGGAGTGTCCCATTTTT10.7692307692307693No Hit
CCCCTTGGGAGTCCCAGTTTTCTCTTGAAAAGTGTAGCACTGATAATCCC10.7692307692307693No Hit
CTTTCCACTTGCACCATCAGGCCATTAGGAAAACAGCACCCCAGGGACCA10.7692307692307693No Hit
AGGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGT10.7692307692307693No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG10.7692307692307693No Hit
GAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACC10.7692307692307693No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
TGGGAGGTAGTGAGTGGTGCTGGAGAGAGTTTAGAAAAAGACACTCTGTA10.7692307692307693No Hit
ATACCGGTGGTGCAGTCGGCACAATATCCGTCATTATTGTAAGACGGGCG10.7692307692307693No Hit
CTACCAAAAGCAGCCGACCATCTTTCAAAACAAGAAGAGGGTCCTGCTGG10.7692307692307693No Hit
GGAGGCTTGTTTACAACTCATCTACTTTTAGCATGGCCTTCTAATGCAGG10.7692307692307693No Hit
GTGGTCCCTTTTCTGCCTAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTG10.7692307692307693No Hit
ATTGAGGGCACCTACATTGACAAGAAATGCCCCTTCACTGGTAATGTGTC10.7692307692307693No Hit
GTCCTTGGCCATCGACTCGATGGCGGCGGGTGCGGCGTCGGTACGGAAGG10.7692307692307693No Hit
TCACAAAAGAGCTCCATGGAGAGGCCCAGGTGACAGAGGCCTGAGGCTCA10.7692307692307693No Hit
GCGCTGCGACGACCGTCGCCCCGGGATACGTCGCCGAGATCTCCCCGGCG10.7692307692307693No Hit
CGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCG10.7692307692307693No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGCTTCCCATGTACTCTGCGT10.7692307692307693Clontech Universal Primer Mix Long (95% over 22bp)
GAANGCAATGGAATGGAATCAACCCGAGTACAATGGAATGGAATGGAATG10.7692307692307693No Hit
CCCTTCGTCCGGTCCAACGCCGAGCTTCTCTCCGCCGACGCCTGCCTGTG10.7692307692307693No Hit
AGCCATCCCTGTGCCGTCGACTCGAAATCGGGTTCGCAGTCGACCCGGTC10.7692307692307693No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGCTTCCCATGTAC10.7692307692307693Clontech Universal Primer Mix Long (96% over 25bp)
GTGCTGAATGCGCTGCGCGAAGCCGAAGCCGCGCTGGACACCTACGCCCG10.7692307692307693No Hit
GTACCCTTCCCCGCCGGCGGCGGCACCGACGTCATCTTCCGCTCGGTGCA10.7692307692307693No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
CATTGCCACCTCCCGGCAACCAGGGATGGCTGGTCTGGTGCCACTAGCCC10.7692307692307693No Hit
TCATCCCCACATAAGATTATATTCAAATACACATCCCTGAATTCCTGAAT10.7692307692307693No Hit
CTGATCTTCTGAGTGCAAGTCACATCTGGAAATCCTGTAGGCAATGTCAT10.7692307692307693No Hit
GGAGGCAAAGTGAGTGGTCACCTGGGCATGGGATTTGGAGCGCATGGACA10.7692307692307693No Hit
AACCATGTCGGCACCTTTGAGGGACTCCTCGATCTCGTCAGCATGGTCCT10.7692307692307693No Hit
TACTCTGCGTTGATACCACTGCTTCCCAAGTACTCTGAGTTGATACCACT10.7692307692307693Clontech Universal Primer Mix Long (96% over 26bp)
TCTCGAAGCGGTTGTACTTGCGGATGTAGTGCAGATAGTCTCGGCGGATG10.7692307692307693No Hit
CGGGAGGGCGCGTGCCCCGCCGCGCGCCGGGACCGGGGTCCGGTGCGGAG10.7692307692307693No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGCTACCCATGTAC10.7692307692307693Clontech Universal Primer Mix Long (96% over 25bp)
CGTAAAATGAGTTAGGGAGGATTCCCTCTTTTTGTATTGATTGGAAGAGT10.7692307692307693No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTT10.7692307692307693No Hit
ACTCGAAGTCGCAGTAGTGTCCCTGAACAATCTACTTTCGGCCGAGGAAG10.7692307692307693No Hit
GTTTCCACGTTTTCAGTTGGTCCCTGAAAATCAGTTGGTGATCAGTTATT10.7692307692307693No Hit
CCATTAGATTCCATTTGATGATGATTCCATTCGATTCCATTTGATGATGA10.7692307692307693No Hit

[WARN]Adapter Content

Adapter graph