FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003660125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGACGGGCGCTGTCCAGCTATGCGGCTCGCGGCCTGCCCCGAGTGCGA316.666666666666664No Hit
TTGAAGAAGCGATCACGATGACGCTGTACGTCTTCAATCGTGATCCAGCG211.11111111111111No Hit
GATCAAACTTAAGCCGATACCGACGATGGTCGCCAGCGCCATACCTTTTA15.555555555555555No Hit
CGACCCGGCTGCGCTGCGCGTGGTGCGCGTGCCGTCCTGCAGGGCGACGG15.555555555555555No Hit
GGTCGCAACTTTAATATCGTTGGACGCACCGGTAGAAACATGTTCCGGCC15.555555555555555No Hit
AGGTGCCGGTGGGTGCCGTGGTTGTGCGCGGCAACGAGATCGTCGGCGTC15.555555555555555No Hit
GGCATGACGCCGATGCCGTGCGCGAGTTGGCCGAGCGCGTCGCACAGTGG15.555555555555555No Hit
CTACTGGGGCACCAGCGAATGGAGTGCGGCCGACATCCGCGCCGCCTGGG15.555555555555555No Hit
CGCCTTTGCCGAACCGCTATCGGACATGCATCGCCGTCGCCTCGACGATC15.555555555555555No Hit
ATCGAAGAGGATGGTCTTGGTCGGCTGCAGGCCATGCTGTACCCAGTGCT15.555555555555555No Hit
CATCGCAGGGGGGCGTCGGTACCTCGTCAGCACAAAACCGCACCAGCCGA15.555555555555555No Hit
GTATGGGGTTGCCCTCGTTCGAAACGGCAATCGTCATCTGCCCGTCGCGC15.555555555555555No Hit
GCCCTTCACCCTCGCCGTGTCGGGCCTGGCGCTGGCCGGCACGGCCAACC15.555555555555555No Hit
GTGGTCGGGATCGGCGGCACTTCGGCCTGCAGGCTGCTCGCCGTGGCGTT15.555555555555555No Hit
GCCTGAAGAACACCGGCGCAACCTGAGTTCCGAGAGAAAAAAGAAACCGC15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)