FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGGAAAGAGAAGAAGGATCAGGCGGTTTGCGGCGCGATGAAGTCTCGC23.8461538461538463No Hit
GGCCCAGCCCCAGCAGCCCGATCAGCACGAAGCTGAGGAACTCGATGCGG23.8461538461538463No Hit
GTTGGCGGCTTTGCCGTGGCGACGGCGCTGCTGCATACCGCCGGCATCGG23.8461538461538463No Hit
TCTTCATGCCGAAGAACGCCTTGCCGAAGTCATCGATGGAGCGCTTGTTG23.8461538461538463No Hit
CCCTGAATGGGAGCGTTGAGGGCGGCACGCTCAGCCATGTCTCGGCGCTG23.8461538461538463No Hit
CGTTCGGCCTGTCGCCGGCGCGCGAGAAATTGAACGAGACGCGCGCGATC23.8461538461538463No Hit
AAGTAGGCGCCGAACGCTTGGTCAAACTTGTCGAAGTGCTTCTCGTCCTT23.8461538461538463No Hit
GTTTGGCGGCATCAAGCAGTCGGGCCTCGGCCGTGAAGGTTCGGTCTACG11.9230769230769231No Hit
GCCGGCCCCAGCAGGAAGTGCACGAACTGCGCGCCGTCAAAGTAGGTCTT11.9230769230769231No Hit
CTCTTTTTTTGGGGTGGCGGGAAGGGGACTGAGTTTTGCTCTCGTCGCCC11.9230769230769231No Hit
CGAGCCCAGGAGGCTGCGTGGGAAGCAGCTGGGGAGAAGATCAATCTGTC11.9230769230769231No Hit
TGGTGGTTCTGTTGCCGTGACCTCCAGCGAGCTTGTCACAAGATTTGACT11.9230769230769231No Hit
GTCCTGCACCAGCGGCCGGTTCTCCTTGATGAGTTCCTCGCGCACGGTCA11.9230769230769231No Hit
GGTCAGGATGCGCGGCTTCTTGTTCTTGGCCTTGCTGGCAAACGGATGGT11.9230769230769231No Hit
TTCGACATGTCCGGCGTCGTCGGCCAAAGCTCGAAGCTCACCGGCAAGGG11.9230769230769231No Hit
CTTATTTCGTACGCGCTGCTGCGCTCGCATAACGAAGCACTACTGGACCG11.9230769230769231No Hit
AACCCATCGATCAAAGAACGCCCTCCCACGGCCAGCCCAGTTCGGTAACG11.9230769230769231No Hit
CCTGCAAGAAGATCGGCTACCGTGGCGCCGGCACGTTCGAGTTCCTGTAC11.9230769230769231No Hit
CAACAGATGCGCGACGAGATCAAGGCCGAGGTGCTGGCCCAGGCCAAGGG11.9230769230769231No Hit
GGTCCCGGGCGGGCCGTAGACGTCGATGGGATCATGGCGCTGAAAATCCC11.9230769230769231No Hit
GTTCGCGCATGCGCTTCCGCCCCGTGATGATGACGGCCACCGTGGCCATG11.9230769230769231No Hit
GTCTGGAAGAGCGAGAAATCCTCGCAGAAGATTGAACACATCCCGTACTG11.9230769230769231No Hit
CAATGGCTTCGAGCACGTCGATGGGCGTCACCACACCTTGCACCACGTCC11.9230769230769231No Hit
GTCCATGTCCTCACGTTCCCTTGTTCGGCATCGCCGGCGCAATGACCGAC11.9230769230769231No Hit
GTACGCAGGTCGAGGAATACCGCTTCCAGAAGGGCCAGGCGCCGGACATC11.9230769230769231No Hit
GGGGCCACATCGTTCTGCCCGTTGCACTGATCACAATCGGGGCCCTCATC11.9230769230769231No Hit
CAATGGCTTCGAGCACGTCGATGGGCGTCAACACACATTGCACCACGTCC11.9230769230769231No Hit
GCGCAACGCAGCTGGCATCGGCACGCACCAGGCGCGGGATAGTCCCGTCA11.9230769230769231No Hit
CACTGGATGAACCACCAGAGCCGAGCCGCCATCGCCCGCCTCGGCGCCAA11.9230769230769231No Hit
CCCTTAGGGAGGCCTTCGTTCCCCACCACTTCCTCCACCATTGAGACAGC11.9230769230769231No Hit
TCATAGCCGATCTTGCCGCCCATCCGCTCGCCCGCCATGCTCATCCGCAG11.9230769230769231No Hit
AACTTGGTCGACTCTTCGGCGCGCTGCTCCAGCAGCGAACCCAGCGGCCC11.9230769230769231No Hit
CCGTTTGCCGGACATCAACATTGCCGCCCGGCCAACGATGTCATTCCGCA11.9230769230769231No Hit
AATTTAACGCGCGGGTATCACCCGTCTGCTTAGCTGAGCTGTGTAGCATG11.9230769230769231No Hit
GAAATCGCCCACGCAGACCGCCGTGCGCTGTGTTGTTCAGGTCTAGGGTG11.9230769230769231No Hit
GCAAATCCGCTTCGGCGGCACGGACCTCGCCGAGGCCGGCGGCACCGACA11.9230769230769231No Hit
GAACTCCATCCAGCGCGTGGCCGAGTGGTCGCGCGCGTTCACGAAGGGGT11.9230769230769231No Hit
ATTCGATTCCTTTCCATTCCCTTCCATTCCATTGCAATCGAGTTGATTCC11.9230769230769231No Hit
AGATCCTGCGGACCCGCTGTCTTGAAGCCGGAGATGGCGTCCCGAGCACC11.9230769230769231No Hit
CTCGTATAGGAGCCAGGAGGCCCACAAGAGAAGACCTATGAGTTTTGAAA11.9230769230769231No Hit
GACTAGAGAGATATCAATGTGCCAGGTGCAAGCAAAGAGGGCATTGGAAA11.9230769230769231No Hit
GGAAAGCCATGTGGTCCATGAGCTTGCGGATTTCGGGCACCGGAGTGGTC11.9230769230769231No Hit
AAGTGGGCGACCTGGACAAGCCGAAGTTGGTGTTCTTCTTCGACGAGGCC11.9230769230769231No Hit
CACCGATGCCGGCCGGCTCCAGGCTTTGCAGCAGGCGGTGGGCGATGCGC11.9230769230769231No Hit
CTTATTTCGTACGCGCTGCTGCGCTCGCATTACGAAGCACAACTGGACCG11.9230769230769231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)