FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAAAGCGCAGCGCGTCGTTCACTTCATAGAAGTGGTAGTGCGAGCCGA23.8461538461538463No Hit
CCCGGACCTTGCCCGCGCCGACGATCGGTTCGAGCAGGCTTTCCACCTGC23.8461538461538463No Hit
GATCTGGCCGCGTCGATGGGCCATCGCGGCAATGCCGGCCATCCGGAGGT23.8461538461538463No Hit
TCATCGACCAGCAGGATGCGCGCATTTTGTACTGCTAATTGTTCAATCAC23.8461538461538463No Hit
CTCCGCAACACCCGCATGCAGAATCCGCCCGTCTCCATTGCCATGTGCTG23.8461538461538463No Hit
GACCCGAACCTTCAAAACATTCCGATGCGTACCGAAGAGGGACGACGCAT23.8461538461538463No Hit
GGAACAGGCACGCGACATGCTGGCCGGCGTAGCCGCGCAGTACGAGCGTG23.8461538461538463No Hit
CTGCAATACAAGCTGGAGCGGCCCTCCATCTGAGCGCCGAAGGACACCAT23.8461538461538463No Hit
GTACGTAATGACCTTGCCGATCATCGAGTCGTAGTTGGGCGGCACGAAGT11.9230769230769231No Hit
GGCAGGTGGATCACCGTACATCAGGAGTTCGAGACCATCTGGCCAATATG11.9230769230769231No Hit
ATCTTCCAGTCACGGCAACCGTCTGCATATACGTGGTGTGGACTCGACCG11.9230769230769231No Hit
GGAATGGCTGCCAATCGTGGTGGCGACCGTCGTATCGACGTGGCTGTCGA11.9230769230769231No Hit
GGACTACATCCATCATCAGACCGAAGAGCTGGCGGCCTGATTGCCACCTT11.9230769230769231No Hit
CCCTACAAGAAGTTCCGCGACCTTGCGGGCAAGCGCATCGCCATCCCGAG11.9230769230769231No Hit
GCCCGCGTTCGCGCGCGAGCCAGTCGAGGTAATGCGTCAGGCGCGAGCGC11.9230769230769231No Hit
CAATATGCTACAGGCGGTTCCGCACAACCAGTTTCCGTTGTGCCGCGGCG11.9230769230769231No Hit
CCACCACCACGAAGCCGAACAACCTGCACGCATCATCACCAAAGTGGGCG11.9230769230769231No Hit
GAGCTCGATCGACGTCCAGACCTACCAGCTCGGCAACGACAAGACCGGCC11.9230769230769231No Hit
GTCTGTGGATAACCTGTGGACCCGCTGTGAGTAGCGGTGGACAACCGATT11.9230769230769231No Hit
ATCGTCAACGGGACGTACTACCTTGTAGACGCCGGTGATGGCGTGCTGCG11.9230769230769231No Hit
GGCCTGGCGCGCCAGCACGGTGTCGAGCATCAGCGGTGCTGCTGCGTGCG11.9230769230769231No Hit
GCGCAACACCACCCGGACTCCCGGCTGGAGTTTGGCGGGAGCCCGGCAGG11.9230769230769231No Hit
CTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCCTTTTTCTTT11.9230769230769231No Hit
GTACTCGGCTTTATCGGTGCCGACGTAGTGCCCGAGTTCGCAGGAATCTT11.9230769230769231No Hit
ATCGAGCTCTGGGCGCGGCGGATCAGCTCGAGCCGGGCATCGAGCGCGAA11.9230769230769231No Hit
GTATTGATCCAGCCAGAGAGCGATCTCGGCGTCGGAGACCGGGGTGAAAA11.9230769230769231No Hit
TGATTCTGTGGTGCGCTCGCTCGTGTTGGTAGTTCGGGTGCCGGCTGCGG11.9230769230769231No Hit
GTCGAAGATCTCGCTCTGGCCGCGCACGCGCAGATCGCCGCTGACCTTGA11.9230769230769231No Hit
CATGAAGCCCGCACGGGAGCTGGCCGTGTCGATGATGATCGACCTCGAGG11.9230769230769231No Hit
ACCCAGGAGAAGGTGACCATCTGCAGCCTGGAGGAGGCCGACCCTGCTGG11.9230769230769231No Hit
CGCGTGTCATCTTGGTGACGTTGCCAAGCTCCGCGCGCAGACCATTTTCC11.9230769230769231No Hit
ACCATAGGCTCCTCGGGGCCCAGTGAAATGGAGCTTGGTCTGTCTCAGTC11.9230769230769231No Hit
GAGGAGGGAATAGCCGACGAGAAGCCCGGCGGCGACAATGAAGGTTATGA11.9230769230769231No Hit
ACCTGGCCCAGCAGCTCGCCGGCCTGCACCTGTCGCCCGAGGATCGGGCC11.9230769230769231No Hit
TTCATGAAGTCGATCAACGTTGAAGTCGGAGGGCTTGTATCGAGCCTGAG11.9230769230769231No Hit
CTTCATGCCTTCGACTCCTCATCAAACCATTTGTACAGCGTGGGCAGCAT11.9230769230769231No Hit
CAAGTTGCTTCTGGCGGTGCCGCACAACCAGTTTCCGTTGTGCCGCGGCG11.9230769230769231No Hit
GTCCGGCATGCGCTGGTGATTGCGCAGCACGCCGTCCTGCTTGGCGCCGA11.9230769230769231No Hit
GTACCCACACGGCGCCATAGCCGTCTTCTTCACGCCAGGTGCCGTTGTCG11.9230769230769231No Hit
GAATGGAATGGAATGGAATCATCCGGAACGGAATGGAATGGAATGGAATG11.9230769230769231No Hit
GCTGGCCCTGATGGGCGGCGTTGCGGCGGCGCTGCTGGGCGGGCTGGCCT11.9230769230769231No Hit
CCTTCTTGTCGCGCGGCGTGAACGCGCGCAGCGCATGCTGCACCCGGTTG11.9230769230769231No Hit
GCGTACGGTGGAGGCGCAGGCCATCCCGAGTTACGCGCCCAAGCAGGCAA11.9230769230769231No Hit
GGGGCCAACTGCTGGATCACACGGGTCCCGTGGCCGCGTCTGAGCGCAAC11.9230769230769231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)