FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length140
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGCCGGCTACTGGCGGGTGTGCCGTTGGTGTCTTGACCCTGGTGAC44.123711340206185No Hit
CACCCGCATGGCCTTCGCGGGCATCAGCAACACCCAGCAGCGTGCGGACG44.123711340206185No Hit
GAGCCGACCTGCTGCTGCACGCCGTCGTAGGCCAGCGAGATCGCTGCGAT33.0927835051546393No Hit
CCCGTACTGCCGGCGCTTCCACTCGATCAACCGGTGGAGCGACCGCGGGT33.0927835051546393No Hit
CTGCGCGAGTTCGACCAAAACCCAATGGCAGAAAGCTCCCTCACCCGCGA33.0927835051546393No Hit
GACGTTGGAAAAACAAGGAGCTGGAGCCTTTTGGCCGTTTCACGAAACCA22.0618556701030926No Hit
GTGCGATGGGATGGTCTCGGGCCTGGCGAGATGCCATCCAACGATGCCAT22.0618556701030926No Hit
GCCCTCAGGCGCGCGGCCCTCAGGCGCGCGGCCCTCGGGGGCGGGAGCGG22.0618556701030926No Hit
GTTTTCGCGCAGGTTTTGATTTTTTGTTGCTGCGTGAGCAGTGCGGCGAT22.0618556701030926No Hit
GGATTATATATCAGGTGATAACAATGGTACGACGGATGGCATTCAAAGTA22.0618556701030926No Hit
CTGAACGTCAGGGTCGCGCGCCAGCGCCGCCAGCGCCTCCGCCGGCATCG22.0618556701030926No Hit
ATATGAATCAGTCGACACGTGCTTTAAAAGCTTTAGCACGTGAACCCTAT22.0618556701030926No Hit
GTGACGGGCCGCTGCGACCGCCAACGGCACCGCATGAGCCATCGCGTAGG22.0618556701030926No Hit
GCGCGACCGGCTCGGGCAAGACCTCCGGCTCCGGCCAGGCCGTCGCCAAG22.0618556701030926No Hit
GGACTACGGCGCGCGCTTCCCGGCGCTGGCGGGGCGGAGGGTGATCGTGG22.0618556701030926No Hit
GATATAGATCGGCTCGGCGTGTCCCCGCGCCCGCAGCTCCGCGATCACCC22.0618556701030926No Hit
GGTCAAAGATAAGTTCCGCAGGTAAATAGACCAGCGGCCAGAATCGGCAC22.0618556701030926No Hit
GTGCGCGTGCGGGCGCGGCGCGGCGTCGGGGGGGCCCCCCGCCGGGGGGC11.0309278350515463No Hit
GTCCAAGGGCCAGGCAGATTTTCCAGAAATATGGTTTTAAGCTTAAGGTA11.0309278350515463No Hit
GTTGGAAGAGGAGGTCCGCCGGATGCGCGGACGCCTCGACGAAACCGAGT11.0309278350515463No Hit
CTTTAGCAAAAACCATCAATGGCTTGATCTTGCCACAAGAAGGCAGTGTT11.0309278350515463No Hit
GGCGAACATAACCGGAACCCGGGTCCGATGCGATTCCGTTTGGCTTCCCG11.0309278350515463No Hit
AATCAAAATTAGTCATTTTTCCCTACATAGCGACAAAAGGCTGGAATGTC11.0309278350515463No Hit
GTCATTGGCAAACACTTCGCCGGAGACGCCTTCGGCAAGCAGATTGTCGT11.0309278350515463No Hit
CTGCTGTATGGCATCGATCATCGAATGGGCCCCTGCTCGCGGTAACGATG11.0309278350515463No Hit
TATCTTGATAGTACGTACACCACCAATTGTCACTGGTTTAGATGCGTTTG11.0309278350515463No Hit
ATAGAATGGAATGGAATGGAATGGAACGGAACGGAATGGAATGGAATGGA11.0309278350515463No Hit
TAATAGACGTTGCTCAATGATCTTGATGTAGTTCGCATCGATCTCTTCTT11.0309278350515463No Hit
CAGCAGGCCCTCGATGCGCGTCGCGCCCACGGCGAGGGCGCCGAACATGA11.0309278350515463No Hit
GGTAAAGGCAAAATCGATATTCAAACTTGGGCCAATGTCCGTGGCTTATA11.0309278350515463No Hit
ATCCCAAGATGCACTTCATCGAGAAGCAGTTCGCGGGCGACTGTACCAAC11.0309278350515463No Hit
CACATGCACCCGCAGGCCTCGCGCGGCGGGGCGGAGATCGCCGCCTACCA11.0309278350515463No Hit
TGATTGGTGGGCTGATTGGCTTTTTCCCTTATAATAGAAAACCAGCAAAA11.0309278350515463No Hit
TCACATAGTTGAAACTTTCTTTGGATTGAGCAGTTTTGAAACAGTCCTTT11.0309278350515463No Hit
GTTCGCCGGCCACGACCGCCGACGCGTACTCGACCGCATGATCGCGGCCC11.0309278350515463No Hit
GTTGACCAGCACTCGGTCCACCCCGGGCGCCTCCGCCGCCAAGCGGATGA11.0309278350515463No Hit
GCGCGGGCCCGGCGGAGGCGGGACCGGTGCGGCCGCACCACTTCCAGCGG11.0309278350515463No Hit
CCGGCATCCTGACCCTGCTCGGCCAGGTCCCCTTTTTCTTCGGCAATCCG11.0309278350515463No Hit
CGGCACCACGAACTACATCTTGGACCAGATGGACTCCACCGGCACGGATT11.0309278350515463No Hit
GCCGGTGGCATTCTCAGCGGCGTTCATGGATCTCACGGCGGTAAAGATGT11.0309278350515463No Hit
AGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGC11.0309278350515463No Hit
GGACAATATCGCCCTTTCCTGGAGACCTGTCCTGATATGCCCACGTCCTT11.0309278350515463No Hit
GCCTGACGCAGGAGGAGTTCGCCCTCCGCTTCGGCCTCGGGCTCGACACC11.0309278350515463No Hit
GCTCTGTGGATCAATGGTCAGATCCCCACCGGTGCTTGGCAGAATGCTGA11.0309278350515463No Hit
TAATTGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAA11.0309278350515463No Hit
TCCTCCATCCGCATCCGCACGCGGGCGGCACCATGAACAACCGCATGGTG11.0309278350515463No Hit
CGTAGAACACATGATGATAGCCATACAACTTGGATTCAAAAGGTCGGTAA11.0309278350515463No Hit
CGCTGGGCCCCGTCGAGGAATTCGCTGGGCAGCACCTCCACGGCGGGCTT11.0309278350515463No Hit
GATCTGCCGGGAGCCGTTCGGCGGCGGCAACGCGTTCGACCAGCCGCTGT11.0309278350515463No Hit
GGCGGAGGTGCTCGTACCCGGTGAGTTGCAGGAGCTCCTCGATGCCGGGG11.0309278350515463No Hit
CCTTCGAGCAGCGCGTCCTCGGCAGCGAGGGCGAGTTCCGCAAAGTCCCG11.0309278350515463No Hit
TAGTTGTTCGCCTCGAAGGCAATAATGCGGAACTGGGCGCAAAATTACTG11.0309278350515463No Hit
GGCCACCGGCGTGCGCAATTCATGCGCGGCATTCGAGGCGAAGGCGCGTT11.0309278350515463No Hit
GGGCTGAGACGATGGGGTTTTCTAAATATACAATCGTGTCATCTGCAAAC11.0309278350515463No Hit
GCTGATCGGAGACCGAAGCCAGCGCCCGTCGGAACAGCTCCGGATCGTCA11.0309278350515463No Hit
TGTCGCGCCAATCACGACACTGAAGATGAACACAAAGGCTAAGTTTCTAA11.0309278350515463No Hit
CAGCCGGGGAGGAGGAGCGCGCAGGCCAGCAGGGCGGCGGCTGCGGCACC11.0309278350515463No Hit
GGCCGGTAGGGCCGACCAGGTGGGAGAACTTGCGGGTCAGGTCGCCGGTA11.0309278350515463No Hit
GCCATAGAGGCAGTATTGATGAGAGCCGGTCAAACGCTAGCTTCCTTAAA11.0309278350515463No Hit
GACCTACTCGGTCGAGCCGCTCGGCTACCGCCGGGACGGCACCATCACCC11.0309278350515463No Hit
GCGTCAGCTCGATCTGGTAAACCACGGAAGGCGCGGTGGTGATGAGGTCG11.0309278350515463No Hit
CGAGTCAACCAGGGTGAATTGCGAGTAGGTGCCGGGACGATCGCGGTTTC11.0309278350515463No Hit
ATATATAAGAGAGTGCTAAAAAATCATTAATGTGATTATAAGGAGGAAAA11.0309278350515463No Hit
CAGCAACACTTTGTCACAATCCGCTCGGTTCGCAGGCCGGCGGAGCGCCC11.0309278350515463No Hit
CGTTACACCTTTACCTAAATAACGTGTTTTGTCTCCGTCACGTAATTCTA11.0309278350515463No Hit
TTTACGTATTGCCCATTTGGAACCTAAATTTTGAAAAGAAAAACGAAATG11.0309278350515463No Hit
AACCTGGGCAACCTGGGCGACATCGTCAAGGTCAAAGACGGCTATGCCCG11.0309278350515463No Hit
CCTCCTATTAATGGGGCATTCCTTCCTGCATGCCCAGACCCCACTGTCTG11.0309278350515463No Hit
TTCATGCACTAATGTATCCTGAATCAAGTGAAAGCCGCATAAAAAAGACC11.0309278350515463No Hit
TTAATCAACTCTGTTGAAGCATGGTGTTTAAATCATCATATCCTTCGTAT11.0309278350515463No Hit
CCACATAAGAACATGATAGTCAGCACTTTTTTGATATGGAATTTATCTGC11.0309278350515463No Hit
ATCTTCTTCAACACGAGTGATGCGTACCGGAAAACGGTTCAAGCCCAAGG11.0309278350515463No Hit
CAGTAGCGCGGCCGCATCCGGCTTTGCGAACAACTTGCTCTCGAAATCAA11.0309278350515463No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)