FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length140
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCTTAGCGGCGCGGTTGCGAGCTTTTTTCTCGGCTTTGACGGCGTGGT44.123711340206185No Hit
GGCGGATGGCCGCGCCGGCGAGGTCCGCCGCCGCCTCCGCCGCGAGGAGC44.123711340206185No Hit
TCACGGCGCCCGGCTGGGACTTCGACGCGCGCGCCCTCGTCCGCGCCGCC33.0927835051546393No Hit
CGCTGCCGCGCACGAATTGGTATTCGGGCTCTTGGAAAACGTAGCCGATG33.0927835051546393No Hit
CCGCGAGATCAGCCTGCGGTCGGAGATCGCCTTCACCGATTACGTGGCCG33.0927835051546393No Hit
CTAACAGACCCTGAGTAAGTGGCGTGTTCCAATAATCCATATATCCGTTA22.0618556701030926No Hit
GCGGCCGCGTTGGCCTTTTTTGTAAGCGCCGCGGCGTATGCTTTCATCAA22.0618556701030926No Hit
AAGCCGAACTCAGTCGTTCACACATCAACGTCTGTTCATTGTCGGTCTCT22.0618556701030926No Hit
ACTCGGGCTACATCAACGCCTGGTTCGAGTGGCTGCCGGGCGTCGACGCG22.0618556701030926No Hit
GCGAGGTTCTGTCCATGTGCGATGGCATTCCTCCGCTGGCGCATGTTCTG22.0618556701030926No Hit
TCGATCACCCGCATGAACAGGGCGACCAGGTTGTGCGTCACCAGGCGCTC22.0618556701030926No Hit
CCCGATACCGGCGACGAGATCGACAAGCTTTTGGAACGGCTGCGCGCCAA22.0618556701030926No Hit
GTGCAGGTTCGCTTGGCCCGCGCACCGCTCGCGCCAGAAGGCGAGGTCGC22.0618556701030926No Hit
ATGCTAGAGATTAGTGCTAAGGGGGTGGCCAAAGACTCCGGTTTGTCCAT22.0618556701030926No Hit
GATCACAGTTGATGCCAGACATCGCAATACACTTCTTCTCCTGTGTGTCC22.0618556701030926No Hit
ATAGGCTCGATCCGGCGATGCGCCGGAGCGTGATGCGGAAAAGCTGGGAT22.0618556701030926No Hit
ATCTTGAGCACGCCGTTGGGCATGCGGACCTGGGCCTTGGCGACCGGGTA11.0309278350515463No Hit
GCGACGCGCTGCACGAGCGCCTCACCGCGCGCTTCGTGGACCGCCGCGCC11.0309278350515463No Hit
GTCCAGATGCCAGACAGTGGGGTCTGGGCATGCAGGAAGGAATGCCCCAT11.0309278350515463No Hit
GGCCGCGGCGTTGGGGTAGCGGTCCTCCACCGCGGCGCCCGCCGCCTCGC11.0309278350515463No Hit
GTAGGCAAAGTTAGTTGGATTGAGTTCTGCACCTTTGGCCAATACCCGAA11.0309278350515463No Hit
AGACAAGACACCACGCATGCCGCACGCTTGCGACTCACTCACCTGAAAGG11.0309278350515463No Hit
GCGTAGTCCCGGCGGTTGAGCGCCGCCTGCCCTTCGGCGATGAGGCGCTC11.0309278350515463No Hit
GCTTCAATCAATACAATACTGAAACCGTTGAAGCTAAAGACCAGGCAAAT11.0309278350515463No Hit
CCTTGGTCCGGTGTGCCCGGCCGCGCCCGCGCGCTCGCCGGAGCGACGGG11.0309278350515463No Hit
GATTAGGAGAAATAATATATGTACAATGACAACGGAAAAACCGTAGAATT11.0309278350515463No Hit
GTCTTGATCCGCACTGTTGCGGAACACGTGATCGACCGGGCTTCTATAGA11.0309278350515463No Hit
GTTACGTGGGAGCATCTCCAGAAACTCTAACTATCCAACAAGAAAGTGTA11.0309278350515463No Hit
CAGCATGATGCGTCGCCGCGCTTGGAGCATGGCGACGCGCAGGTGGCGGA11.0309278350515463No Hit
GGTCATCACCAGTGACACCCAGTTTGTACTGAATGAAATACAAAAAGGGG11.0309278350515463No Hit
CTCTCGGTCGCGGAAGGCGAGTTCGTCGCCGTGGTCGGCCCCCCCGGCTG11.0309278350515463No Hit
CGCACGACCTGCTCGTTGAGGTCCAAGCCGTCTCGGTCAACCCCATCGAC11.0309278350515463No Hit
GGCATGGACCCGGCGGTGGTGAAGACCCTGCACGACGGCTTCAAACGGGC11.0309278350515463No Hit
CTATTCAACTCCATTACTCTCCATTACATTCCATTCCATTCGGGTTGTTC11.0309278350515463No Hit
GCGCTGGAATTCGCCGATCCGCTGGCAGAACGGGCCGAGGCATGGCGCGA11.0309278350515463No Hit
GTGCAGATCCCGCAGGAGGCTTTCATCGCGGCGCTCAGGATGGGCGACGA11.0309278350515463No Hit
GTTTTAATTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTTGGAA11.0309278350515463No Hit
TGCGGGAACTGGTCCGTCTTGACGACCTCGGTGGCCCGCTTCGCCAGCCC11.0309278350515463No Hit
GTGGTGCAGGTGCACCACGTCCGGCCGCAGCTCCGCGAGCAGCGCCGCCA11.0309278350515463No Hit
GGCCCATAGAAGTCTGGTCTTACGTTCTACGAATGTAACCAGACATGATC11.0309278350515463No Hit
CAGTTATGCCTGGGGCGGCGAGCGTCTGGAATTCACTCGGCTGCAATTGC11.0309278350515463No Hit
GCCTGCGGTCGCGGTGTCGGCCACCTGGAGTCCGGGCAGCTCCCACATCT11.0309278350515463No Hit
GGATCTTCATGCGCTTCCGAGGCGCACGGGAGGCCTGACGCCGCGGGCGC11.0309278350515463No Hit
GGGCTTGGCGGCGCGGCGCAGCAGCGGCCACAGCTCCACGGCGCCGGCGT11.0309278350515463No Hit
ACACGAAGCAGTAGAATTACGTGACGGAGACAAAACACGTTATTTAGGTA11.0309278350515463No Hit
AAATAGTTGAGAGGTAAATTAAAGTAGTAACTTCGACATGACATATTTGT11.0309278350515463No Hit
CAACTGCGGGGCGGGCCGATGCCCTACGGCCACGCCAGCCACCAGACAGG11.0309278350515463No Hit
GTACCTACTGCAACTACAGTCCCTTCATTTGTCTTCTCTTTCGCAGAATC11.0309278350515463No Hit
ACCCACAGCCAATATCATACTGAAGGGGCAAAAACTGGAAGCATTCCCTT11.0309278350515463No Hit
GCGTGCCATTGATTTTCTCCACTAATATTTCTGCCTTCTTCATCAATTTC11.0309278350515463No Hit
TGCCAGTACCGCACCTTTCCAGTTAAATATCAGCTGAATTCCCCATGCAT11.0309278350515463No Hit
GGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATAT11.0309278350515463No Hit
TTATTAACTAATACGCTCATGTTAGATACTCCTTAAGCTTTTACAGCAGC11.0309278350515463No Hit
GACCAGGTCGCCCAGGACTGCCGAAGCCGTGGCCAGCCCGCCGGCGCCCT11.0309278350515463No Hit
GCATGAAGGCAAGTCGATCCGTACAGTCATTCATTTTGACTAAGCTGTTT11.0309278350515463No Hit
ACTTCGAGAAGCTGCGCGACTCGATCGGCAAGCTTCGGCTCAACGACGCG11.0309278350515463No Hit
GTACAGACATTCGAAATGTTAGATCGTTTAAAAGGTGAATTTAAAAACGT11.0309278350515463No Hit
GCGCGTGGCGGTTGCCGCCGATGAACAAACTCCGCCGGAAGCGCTTGCGG11.0309278350515463No Hit
GCGGAAGATGTCCTCGGCCAACTGGTCCACCAGCCGCGCCTCCATGGCGT11.0309278350515463No Hit
GTTTGCCGATCGTCGACTACTTCCTCTGGAACGACGACTTCGAATTCAGC11.0309278350515463No Hit
GGCTACTACCGCTTTCTGGAGAAGGAGAAAACGAACCGCCATGGCCCACG11.0309278350515463No Hit
AGCCCGACAGGGTGTCGGGCTTTTTTTTATCATCTATAAATGTCTCATTT11.0309278350515463No Hit
CATCTTCCCGTTCGATCTCACCTTCCACCAGACGACCCGCCATCTGCACG11.0309278350515463No Hit
GTCAAGCAGTCAGTTACAGCTATCATACGTGACGCATATCCACAGTTCAT11.0309278350515463No Hit
GGGCCACGCTGAACGCGGAGAGCCGCAGGTTCAACCTTCCGCAGACGCAA11.0309278350515463No Hit
CAGTTGCACCGGCTGGCGCAGCGGCGCATCGCGCAACAGCCGCGCCATCG11.0309278350515463No Hit
CTGTTTCACAAACGTAGACAAGTCCAATTAAAAGTAGCGTCCATTCTTGA11.0309278350515463No Hit
CTTCGCCCTCAGACTGGGTCGATCGGGCGGTCTGGTCGGCGGCATGCTGA11.0309278350515463No Hit
ATGCGCCGAAGCTGACGCCCGCCACCCAGGTCTGCGACGCTTCGGCGTGG11.0309278350515463No Hit
GTTTTAAATGCTGTAAATGCCGCTAAAATTCCGACGACTAGACTTTGAAA11.0309278350515463No Hit
GCGCGAGTCGGTTGCCGCCGATGAACAAACTCCGCCGGAAGCGCTTGCGG11.0309278350515463No Hit
ACGCCGAACCCACCACTCATTTCGGCTACAAGAGCGTCCCGGAAAGCCAG11.0309278350515463No Hit
GTAGGGGACGGGCGCGACGCGGCAAAGGTAAACGTCGTCCGCCGGCCGCG11.0309278350515463No Hit
TCCGTACTTGTTCCAGAGCGTCTTTGACACGAACCAGCATTTCTTCTCGC11.0309278350515463No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)