FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length140
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTATAAGAAGGTGAGCGAAGGACCCCCTCTGAGGCTTTGGAGGTCAG26.451612903225806No Hit
GCTATGTTTCAGCCTCAGAAATCAAATTTGACAGCCAGGAAGATCTGTGG26.451612903225806No Hit
CGGGCGAGGCGATAAGCCGCTGGACCGTGTCCAGATCGCGCATCCCGCTG26.451612903225806No Hit
CTTCTCTGTCCTGCCTCAGTTCTTGGTCTGTCTCTTATACACATCTGACG13.225806451612903No Hit
GGCCCGGCGCATCCCGGGGCTGGTTGTTGGGAAAGTCTCGGTGGCAATTT13.225806451612903No Hit
AAGGAGATGTAGAAAAAAGACCTCACTCAATGCTGTTCTCTTTCTGTCTC13.225806451612903No Hit
CATCCTCGTTGGCGTCGACTGCCTCGAAACTGTCTCTTATACACATCTGA13.225806451612903No Hit
TTGTAACGGCGCGTGTCGCGGCTCTGCGGTGGCTAGCTGGGGTGGTGCTG13.225806451612903No Hit
ACATGTGGCTTTGCAGATCCTCGGCAGCCTACTCCCTGTCTCTTATACAC13.225806451612903No Hit
CTCCAAGGGACCTACAGTGCATCCCCCTAGAGTGTTTGGCCTGTCTCTTA13.225806451612903No Hit
TTCCTGGGGCTGGAGGGTCCCTCCAAGGCCAGGGGTCCGGGTGATTCCAG13.225806451612903No Hit
ATTGGCATGTCCTGCTCATCAAGGACCTGCGATTCTGGGTTCGTTGAGGG13.225806451612903No Hit
GCGGTCAGTGATCTCCGGGTGCGACTTACCGTCGGGGCCTGTCTCTTATA13.225806451612903No Hit
GTCGATACCCAGAACGGCATTCCTTTCTTCGCCAAACTGGTCTCGAAGGC13.225806451612903No Hit
GAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATC13.225806451612903No Hit
CTACTGGGCGTCACGGACCTCACGCTTCTCGACGCCGCCGTCAACGCCAT13.225806451612903No Hit
GATTGAGGTGTAGATATGACCATTGGCTTCAAAGGCTTGGCCTGTCTCTT13.225806451612903No Hit
GTTAAGAAGCTTCAAAAGGCAGCTCTCCTGAAAGCTTCTCCCAAAAAAGC13.225806451612903No Hit
GTTCACCCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCAC13.225806451612903No Hit
GACACACGGTGCTGATTGGTGTATTTACAATCCCTTAGCTAGACATAAAC13.225806451612903No Hit
GAGTACATGGGATTGCACTCCAGCCTGGGCAACAAGATCTGTCTCTTATA13.225806451612903No Hit
GACCTGGTCTCCACAAAAATTAGCCAAGTGTGGTGGTGTGTGTCTGTGGC13.225806451612903No Hit
GGCGGTGATTTATCGTTAATCGCCGTGGTCGATTGTCCCGAAGCTACTGG13.225806451612903No Hit
ACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCCCCTGACTCGGCCTCC13.225806451612903No Hit
AACGTGCGGACCCGTGCGACGACCAAGCGGCTCTATCGGGCGATGCCCTG13.225806451612903No Hit
GTCCTATAAGAAGGTGAGCGAAGGACCCCCTCTGAGGCTTTGGAGGACAG13.225806451612903No Hit
CTGGACCACTACCTTAATGTAGTTTCTTGCGAAAGTCAAATTCTGTCTCT13.225806451612903No Hit
CCTATTGATTCCGGGATTAAACCTGCTTGAGAACGCGGAGTTGTCTTGGG13.225806451612903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)