FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTAGATCTCTCTCTGAGCAAGGCCTACAAGGCCACTACCAGCCTAAC33.3333333333333335No Hit
TCGCCAGCAGCGGCGCCTCGTCGGTTCGGGTGTAGACGATCCGGGCGGAC33.3333333333333335No Hit
CTAATCGATGATCCACTTGATTCCATTTGACGACGATTCCATTCTTGTCC33.3333333333333335No Hit
ATTTCATTTTCTCCATTTCTCATCCATCCATCCAACAGCACTGATGAAGC22.2222222222222223No Hit
ATATATTATCTTTTTTATATGCTGTTGGATTCAGTTAGCTAGTATTTTGT22.2222222222222223No Hit
GATTTCGACCGCGGATTTCATCTCTTTCCGTTTCATCGCGCGGCGCTGGA22.2222222222222223No Hit
GATCAGGGGTCGACGTCGGGTAAATCGGCACCGGGATCACGCCAATCGTC22.2222222222222223No Hit
TATTTATTAGTAAGAATTCAATGAGCAGTACAGATGTGATGGGCAGGAAG22.2222222222222223No Hit
GTCGCATCCGGCACCTCGGGTATGCCAGAAACGTGAACACTTCGTCCCCG22.2222222222222223No Hit
CAGCAGATCCTTGGGATTGGTCTTGCCAAAAGACACCCGACTAGCTAGCC22.2222222222222223No Hit
GGGTTCCGCCCAGGCCCTCTCCTGATTGACTCTCTGCCCGGGGACAAGCG22.2222222222222223No Hit
AGGTATAACTGCCCTGTTGACACTGTGCACAAGCGACATGGCTCTTGGGG22.2222222222222223No Hit
GGTTGGCCTGCTGGCTGGCGAGCTGGTTGGCGTAGCCGATGGCCTGCATT22.2222222222222223No Hit
CCATGCGCTGGTAGCGAACCCAGATGTCGGCCTGGGTGTACTCCATGATG22.2222222222222223No Hit
TGTCGGAGCCGGGCTGGTGGGTCAATGACGGCCCGCTGGGTGACCACGAG22.2222222222222223No Hit
CATTAATATGGATGATACCTAGTTTTTTAAAGACCCATTCTGCTTCCCAG22.2222222222222223No Hit
CGTTCATGGCCCTCATGGGTTCTCTGGGCGTCATCGGAAACTGGGCCGAC22.2222222222222223No Hit
CACATGGCAGCGGATGCGCTTGATCACCTTCAGGCCGCGCTTGTCATACA22.2222222222222223No Hit
CAAAGAAAGCCCCCAAAAAAGTGGTTTAAGGGATGCAAAAGTCTGTTTCA22.2222222222222223No Hit
TCTGAATCTTCAGTGAGCCATAATCATTTTGCTGGTGCAGGGTATTGCTT11.1111111111111112No Hit
GTTCGACATGGCCTTCGACCCAGGTACGGTGTCGTGGCACCTGCAGGATC11.1111111111111112No Hit
AGTACATAGTGTGAGTCTGAGAAGAAAAGTCTCATAAAGCTCTAATCCTT11.1111111111111112No Hit
TTGAAAGTGTTTCTTGACGATGTCCGGCAATGCCCCGAAGGTTACAGTTT11.1111111111111112No Hit
CGTCAAGGAGGAGTACCGCGGCCTCGTCGACCTGCATGCCCGCCGCCTGA11.1111111111111112No Hit
GCCCAAGAGGACGCGCACGCGATACCGCCAGAGGTGTTTGAGCAGCTGCT11.1111111111111112No Hit
GGCGCGTCCAGCCAGACGTAGAAGTATTTGCCCGGTGCGTCGGGGATCTC11.1111111111111112No Hit
GCCTACAGTCTCGGCCATGGGCCCGCACATCGACCGGCCCACAGGAACGA11.1111111111111112No Hit
TGCCAGTGCCGATGACGATGAAGTCGAGGTGCTGGCCATTCACGAGCGCG11.1111111111111112No Hit
AGCACCAGGTGCACGATGTTTTCCGCCAGATCGTGCTCACCGGCCGAGAT11.1111111111111112No Hit
ACCCAAATTACCCAATTTTTCGACCGACTAGGCACTCCGACAGCTGGTCG11.1111111111111112No Hit
GGTCGCCAGCAGGACGATCAGGCCGATGGCGCCGACCGTGGACAGGGCGA11.1111111111111112No Hit
GAACGCACCGTTTGATATGGCGAGAGGACGACCTCGGGGCGGACCAGCAC11.1111111111111112No Hit
GGATGAGATTGCTGCGGGGCTGGAATCGCGCCGGCGCAAGCAGGCGGAGC11.1111111111111112No Hit
GACACCGGCCCGGGTGCCGCAGCACTCCACGACGGGCGGCGCCCCTTACG11.1111111111111112No Hit
CTCTTACACTCAGCAGAGGCTGGGGCAGTTTGCAGGCCTTCAATAAAGAG11.1111111111111112No Hit
GGCATACGCATCGTGATGATTTCCTTCTTGATGCGGACCAGCATGCGGCG11.1111111111111112No Hit
TGCACCACCATGACCGGATGACTTTTGTATTATTAGTAGAGATGGGGTTT11.1111111111111112No Hit
GAGCACAGGGGCATCGTTGAACATCGAGACGGTGCCGCAGGGCGGGGCAC11.1111111111111112No Hit
GCGCGTCAAGCCGCAGATCACCGATGGCGGGCTGGTGAAGATGCAGATCT11.1111111111111112No Hit
CGTGGCCGAGGCGCTCGCGGCCGACCCGGCCATCACCCATGTCGGCGTCA11.1111111111111112No Hit
CACTAGAAAAAAAACAGACCTAATGAATGTTGTGGGCTCTGCCAATTAGA11.1111111111111112No Hit
TCTTTGCGCTGATCTGGATTGTCGCCGGATGGTTTGATTTGTTTGGGATG11.1111111111111112No Hit
CATCACCGGCACCCGGCTGTGGATGGTAATGCGGCGCTTCTTTGGCCAGG11.1111111111111112No Hit
AGCACCAGGTGCACGATGTTTTCCGACATATCGTGCTCACCGGCCGAGAT11.1111111111111112No Hit
ATTGACGACAATATCGCCGCCCGCTGTTTTCCAAACGATGCCACAGGAGC11.1111111111111112No Hit
AGGCACCGCCCACGCGCGAAATGTACGCCAGCAGCTTGCCGTCTGGCGAC11.1111111111111112No Hit
GTACCTGGTGCGCGAGAACACCGTGGCCATCGCCAACATCGACACGCGCC11.1111111111111112No Hit
GCAGAGCAGGCAGCAGTGCTCTCCAGTAATCACCATAAGGATAGACTCTC11.1111111111111112No Hit
GCAGTGAATGAGAGTTCTGCTGCTCCACATGCTCAGCAGCCTTTGGTGCC11.1111111111111112No Hit
ATGATGATCTGCGGGATGTGGTCGGCATTGCCCTTCATTGCGGTTGCTGT11.1111111111111112No Hit
GAATTGCTTGAGCCCAGAAGGCGGAGTTTGCAGCGAGCCGAGATCACAGC11.1111111111111112No Hit
GGTGTGGCCGTCGGGCTCGGTCGGGGCGCCACCGAGGAGACGTCGAGACA11.1111111111111112No Hit
GGCAGCCGCTCGACGCGCGCCAGCTGGCCCAAGGGCGTCCAGCCACCCTT11.1111111111111112No Hit
TGACGGCACTGATGATGCCGTTCACCTACTCGATCGCCAACGGAGTCGCG11.1111111111111112No Hit
TTTGTGGGCTCAGTGGTGTCCTTCGGAGCCGATTTCGCGATGGCCTGCAT11.1111111111111112No Hit
GTCGAGCAAGGACCCGAACCTTCAAAACATTCCGATGCGTACCGAAGAGG11.1111111111111112No Hit
GTCATCAGCAGCGCGTCGAGCAGCGCCATCGGTGCGGCCAGCGAATGGAA11.1111111111111112No Hit
TCGGAATGTCGTTCAGCCCGGCTGCCGGGCCAGATGCAGGCGCTGCAGTT11.1111111111111112No Hit
TGGGAAACGCGCATGAAGCACTTGCGCGCGCTGCGCACGATGCTGATCGA11.1111111111111112No Hit
GCGCACTTCCGCGCCCCGGTAGTCGCGGTCGAGATCGATGACGCCGCCCG11.1111111111111112No Hit
GAACGCGGGTTCCCGGGCGGACGCGACGGTCGTCACGGGTGCGCCCGTAT11.1111111111111112No Hit
GTCCGACGACGCGAAGAAGCAGATCGTCAACAACGCCGAACTGCTGGACC11.1111111111111112No Hit
TTCATCACCCAGTCCCGTGACAGCACCGGCGCGGCGCAAATCGCCCCTAG11.1111111111111112No Hit
CCGAGGCAAGCCGCAAGGCACTCGACCTTGCGCTGGAACGTCTCAAGCTC11.1111111111111112No Hit
GCTGACGCCCGAGCTGCCGCGCCACGACCCCAACCAGGAGCTGATGGCCC11.1111111111111112No Hit
GTTCAGCTCCTCGTGACCAGGCCGTCTTGCGTGACGCGGCAGGCCGCGAC11.1111111111111112No Hit
ATGTGAACAGTCCAGCCCACAATGCTGCCGATCCTCTTATAAAGTTTAAG11.1111111111111112No Hit
TGCCAGTGCCGTTGACGATGAAGTCGAGGTGCTGGCCATTCACGAGCGCG11.1111111111111112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)