FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90
Sequences flagged as poor quality0
Sequence length140
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAATGGAATCATCGAATGGAATCGAATGGAATCATCATTGACTTGAATT33.3333333333333335No Hit
GCCATAAACGCGTAAAGAGAGGAACGCTTAAATCAGCAAAAGGAAGTCAG33.3333333333333335No Hit
AAGCCTGAGGAGTCCGCCCGAGGGGGCGGTGAACCCGTCCCCGGGCGCTC33.3333333333333335No Hit
GAAAAGCCCTTGGCCACGCCGAACTACAGCTACGAGAAACGCCAGCGCGA22.2222222222222223No Hit
GCGGCAGGGTGCTCCGACGCGGAACGCGCAGCACTTCGGAATGTGGCCCA22.2222222222222223No Hit
GGCTTACAAGCCGTTGGATCTGCAAAAGGGCATGGGCAGCAAGGGCGGGG22.2222222222222223No Hit
GCGCCAGACCCGACTCTTCCACGTGGATGGCGACGCCACCGCGCTCCTCA22.2222222222222223No Hit
CAGCCCCGCAGGCAGCACACCTGTGCTCACACCCTCTTGCCCGTGTGTGT22.2222222222222223No Hit
CCCGCAACCCCCACTCCCGCGGCCGGAGAACAAGGAACAGATCCACGCCG22.2222222222222223No Hit
GGCCATAGTCAGGTGAATATGGTTTTATTCACAGCAGTTTTCATCAACAG22.2222222222222223No Hit
CACCTGAGAGCCGTAATTAAAGATCGTCAGCGGTAGGCCGAAAACGTCGA22.2222222222222223No Hit
CAATAACCGACGAGGCGCCAGCGAAAATCGTGTCCCCGACCCGCGACACC22.2222222222222223No Hit
CCCGGGCCTGGCCCTTTAAGTGGAGGTTTTGGTTACACCTGCAAACATCA22.2222222222222223No Hit
GGCAAGAAGCACGGCAGTCTTTATTGGCTGATGGACGAGACCAAGACGGC22.2222222222222223No Hit
ATGTGCGCACTATTCCGCACGCTATCCGTCATGGTGCCGTCATCGGTGCC22.2222222222222223No Hit
CTGAGACAAGAGGCTAAATTCTCTGCATTTCCGTGTTTCCATTTGTGTAA22.2222222222222223No Hit
CCTCTTGGGAGGGGTTCCTTTTTCCTAAGGAGGCCAACTGGGAAGCAGAA22.2222222222222223No Hit
GGGGAGAACTTCATTGAGAGCCACCTCGCCCACATGTTCCGCGCCACGGT22.2222222222222223No Hit
TGGACGATGTATCCCGGCTTGAGCCACGGCGCCTATGAATGCCTACACGC22.2222222222222223No Hit
ACAAAAAATAAGTCCAGGAGCAGATGGATTCACAGCTGAATTCTATCAGC22.2222222222222223No Hit
CTCTTCCTGCTTCTCGCCTTTGATGGTCAAGCCGCTGTTGACCAGCTTGA22.2222222222222223No Hit
TAGCGCCACTGGTCCAGCAGGTCGAGGGACAGCGATGGGCTGTTGCCCTC11.1111111111111112No Hit
GCCTGCTGCAGCACCCGCGCCGCGTTTGGCGGGCGGCAACGGCGTTGGCA11.1111111111111112No Hit
CGAGCTCGTCGTCCCCGCGTGGGCGGCGTCGCTGATCGTCGTCGGCATCC11.1111111111111112No Hit
TCGCAAGGTTGCGAATAGAACTCGAGCACACCGTCGTCGTACTCCATTCC11.1111111111111112No Hit
CAAAGTACCTGGTCAGCACAACTCAGTTAAACAATGGGCAAAAGACCTGA11.1111111111111112No Hit
CAAGAAAGGATTCTTGAATCTCGAGCAAGAAAGAATTTGGAGGCCTGTAA11.1111111111111112No Hit
CCGCAGGGCGCAGTCGGCCCGTGGCTCGATGATGAGTTCGGCCGCGTCGC11.1111111111111112No Hit
CCTTCCTGCTGTTAGCCTTAGCAGAAGCAATATGTGAGGACAGCAGAGAC11.1111111111111112No Hit
GGTTCACCGTGTCGCTGAGCGAGCTGCTGACGCTGAGGGCCTGCACGGGC11.1111111111111112No Hit
GTATGTGGTCTACCCACCGAACCGCCACCTCAGCCACAAGGTGCGCGTCT11.1111111111111112No Hit
CTGAGCGCACGCGCTGCCGGTTGAGATGCGATCCGCGCTTCCTCCGCCAG11.1111111111111112No Hit
AACTGGGACGATGGACGACGAGTACTTCACGAGCCCCGTCATCAATGTCG11.1111111111111112No Hit
CCTCAAGTCCGTGCCAGCGGCACTGCACGACATTTCGGTGGCCGTCGTCA11.1111111111111112No Hit
GGACCAGTACGGCGACTCCTGCGAGGTCTGCGGCGCGGTCTACGCGCCCA11.1111111111111112No Hit
GGCCTGGACCTTGCCGCGCAGTTCGAGGATGGCCTTGCGGGCCTCGTCGT11.1111111111111112No Hit
CTGGCCGACCCGCTGCGCTTTTGCGGCGAGGGCGACATTGTGGTGGCTGT11.1111111111111112No Hit
CGCCTGCGTGGGCGCGCTCCGCTGTCCCTGCCTCACGCCAAGGTAGTAGG11.1111111111111112No Hit
GGTCAGGTTGAAGCGCCGCAGCCGCGCGAACTCGTGCCATTCGGCCATGT11.1111111111111112No Hit
GCGCTGATCCCCGGCCGCGCGGCGCCGGTGCTGGTCACCGAGGACATGGT11.1111111111111112No Hit
GTCTGATCCCAGGCGTAGGGCTGCTTGGTGGAAACCACCTTGGCCAGATC11.1111111111111112No Hit
ATTAATGACAGAGCCCAGCAAGACTTGGAGCCTGTGTCCTTGAAGACAGC11.1111111111111112No Hit
TCGAAGAGATGCGCCCGCAATACGTGGCGCTGTGCACCGAACTGGGCCTG11.1111111111111112No Hit
GCCAGCGCCTGCGCAAGCACCATGGCGCGCCGCGCGGCGGCCACATGGAC11.1111111111111112No Hit
ACGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAG11.1111111111111112No Hit
CAATCCATAGGCCAGTCCGTAATTCATGGCCTTGATCTTGGAACGTTGCG11.1111111111111112No Hit
GCACTTCCTGCTTCGCGCGATGACCGAAATCGGCGCTGATCGCTTCGGCG11.1111111111111112No Hit
GACCACAGCGCCGCGGACCGGCGCCTGGGGAATGCCAAGTTCACGCTGCA11.1111111111111112No Hit
GGCCAATCCTCTGACGAGGAACGCAAGTGGCGCGCTCGCTCCGACATGCG11.1111111111111112No Hit
CATTCTTGCCAAGCCGCCGGCCCGACGATTGGCAGCAGACCTCGGCGTCG11.1111111111111112No Hit
TTTTCAAAGTTTTTCTCCATCTTTTAAAATTCACATCTGATCCTTAAACT11.1111111111111112No Hit
AATTAGCTGGACATGGTGGCACATGCCTGTAACCCCAGCTACTCAGGGGG11.1111111111111112No Hit
GCTCGGTTCCGACGTGATGGTCGTGTCTGCCCACGACGCGGCCAGCGGCA11.1111111111111112No Hit
ACGGAAGCGGATGCAAGCGAATCCGAACCGTCTCTGGAATTTTTTTGTTT11.1111111111111112No Hit
AACCAATCCTTACCGCGCTGGTCGCACGGACAGCGCTCAGCGCTTGAGCG11.1111111111111112No Hit
GCGTAGACTCGATTCCATGCGGGTCGTCATACAGAGAGCAACCAGTGCCG11.1111111111111112No Hit
AGCAAATGCATGGAGACAGGGACACACGGAACATGCTCAAGGAAGGCCCC11.1111111111111112No Hit
CGTTCAATCGTCGACGGCGGCACGCAGAAACGGGTACGCGAGCCTGCAAC11.1111111111111112No Hit
CTCCATCTACTTCACCAGCGACCGCGGTGGCGCACCGCAGATCTATCGCA11.1111111111111112No Hit
GGTGGCCACCGACGCGTGGCGTAGGTTATCGCGCACGGTGGTCAGTTCCG11.1111111111111112No Hit
ATGATGGTGAGGGTGATGTCCCCCTTGACAGTACGTGGGGCGATCATGAC11.1111111111111112No Hit
CTACATCACATCCTACAGCAAAATCTTTTGTGAAAGGAAGAATCAGTTGT11.1111111111111112No Hit
TGTAGTTGTCTTCCAGCAGTCCGCCCAGCACGACTACCTGGCCGTCGTTG11.1111111111111112No Hit
GCCCTGGCGTCGGATCACCGGAGTAACGGGACGTTGGGGCCTGTCACTCA11.1111111111111112No Hit
CAGTAAGGGCTCAATGGTTATTTTTTAATAAAAGAGCTTATTAAAATAGC11.1111111111111112No Hit
GGGAATGCCAGTACGCGATTCTGTTCGGCGACATAAAGCACACCGTCCGG11.1111111111111112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)