FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTTAGCGGTGTCACGCCCAAGACCCTCTCGCTCCTCAAGCTCACGCG46.349206349206349No Hit
TTCCGCACTGGTCAGAAAACCCAGGCCGAAGGCCTTCAACGCCGGCGCAG34.761904761904762No Hit
CCGCAGGTCTTGGCGGACTGCTGGTAGGGCAGCAGGAATTCGCCGATGGC34.761904761904762No Hit
CGAGTACGCGGTGGCCGCATTCGAGCGCGCCGCTGTGGACTACGTGCTCA34.761904761904762No Hit
GTCCGCCATCACGCCGCCCACCAGGCCGCCGATCCCCCAGCCGAGCAGAG23.1746031746031744No Hit
GGGCGGAAACCGCTATTGTGCACCAGCACAATAGCGGCCCAGTCTGATTG23.1746031746031744No Hit
TGCAGTGACCGGCGCGAATGCGCTTGCGCTCGGCTACGGCCGCTTGACCA23.1746031746031744No Hit
GGCCGACTATGCCGCGTTGCTTCGCGCGGGCAACGCTGACACCGCCACCC23.1746031746031744No Hit
TCATAGTGTTGCCTTTTTGTTATCAATAAAAAAGGCCCCCGATTTGGGAG23.1746031746031744No Hit
TTTCAGACCCATGGCAAGTCATCGACTTAATTAACGAAGTTGAAGATGAT23.1746031746031744No Hit
GGCACACGCAAGGAGATCAAGCGCATCGCAGTCGGCAGGAATGTCGAGTT23.1746031746031744No Hit
GCGCCAACATGGGCTACCTGGCGCACATGATCGCCATGGAAGAAATCAGC23.1746031746031744No Hit
CCTATGGCCACGGCCGGATTGGCGAGCGAGCCGACCCGCACCACGCCTTC23.1746031746031744No Hit
ACCCAGCGCCACCGCACCCTCTCGCAGCATCGCATAGGCGCGCGCCACAG11.5873015873015872No Hit
GTTGCGTGCGCCGTCCCGTTTTGCTTCAAGCAATCGTGTGATCCGCCATC11.5873015873015872No Hit
TCAGTCGGGTGCGCTCGGATTCCTGTTCGAAGTTTTCGAGGAAGCCCTTG11.5873015873015872No Hit
GGCCGGGCTCCAGGTTGAGCGTCACGTCATGCTGCCTGGCCTCGCGCTCG11.5873015873015872No Hit
GAGATGAACAGGAAGGGAGTGAGGGGGTTCTGGCGAGTCGGCGCAAAGCG11.5873015873015872No Hit
TTCCGCACTGGTCAGAAAACCCAGGCCGAAGGCCTTCAACGCCGGCGAAG11.5873015873015872No Hit
GGCGCTTGGGCAGCGGCTTGCCGCCACGGCGCGCCGCATCGATCTGCGCG11.5873015873015872No Hit
AGGCAGCCCCACCGGCCGCAAGGCCACGGCCCTGCGCGATGCCGGTCATG11.5873015873015872No Hit
GCGCTGCGGCGTCAAGCTGTACCGCAACCAGAGCGAGCGGCTCTCGGTGC11.5873015873015872No Hit
TTACGACGCCGGTCGCGGACATTGATGCGGCCAACACGTGGCGCCGTCAG11.5873015873015872No Hit
TCGCTGACCTTGGCCGATGTGCAGCCGGCCACCTGGGTGGTGCCACCCAT11.5873015873015872No Hit
GTCCCACCCCGGCACGTAATTGGAGTCGAAACCGAGCATCTGCTGGCTCT11.5873015873015872No Hit
CCCGCACGCTGATGGCCGAGGGCCTGCCGCCCGACGCGGTGTTCGCCGCC11.5873015873015872No Hit
GCAAATGACCGCCCTGGGCAACCGATGTTGGTGAAGCTGATACAGCCGCC11.5873015873015872No Hit
GATCGACGCACGCATGGTCTTCACCAGGTCGTACGAAGCTTCGGGCGTGT11.5873015873015872No Hit
GTTCATAGCAGTGCTTCTTATCGGTTGTCGGGGGAGGGGGGTGCGGGTCA11.5873015873015872No Hit
GTAGCTGTGTGGCGTGCCGGAGACGCGCTGCGCGTTGCCGGCGCTGCTGT11.5873015873015872No Hit
CTTCTGGTATGGCTGCCCGCACTGCTATGCCCTGGACCCGTCGCTCGAAG11.5873015873015872No Hit
CTTCTATTTTGCAACAGGAGCAAAAATGAAAGCCACGTCGGAAGAACTCG11.5873015873015872No Hit
TCCTGCGCCTGGGCTATCTGGCCGAGGCGCTGGCGCGGCTGCTGGGCGTG11.5873015873015872No Hit
AGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTC11.5873015873015872No Hit
TCATCGTGGTGATGACGGCCATCAGCACCAGCATGGAGAACAGCGCCGGG11.5873015873015872No Hit
GGTCAGCCAGGTCTTGCCCACTCCCGTCGGTCCAGTGACCACAAGATGCT11.5873015873015872No Hit
GTCGCCGGTGACGTCGATGACGAGGTCGTAGTGCTTGCCGGGGGCCAGTC11.5873015873015872No Hit
GTTTATCGGCTTTTCCGCCAAGCTGGCGACGGCCACACTGAATTAATCGA11.5873015873015872No Hit
TGCATGATGAGGCGCGAGGCCTCGCGCGTGCCGACGACGGCGGGGATGTC11.5873015873015872No Hit
AACTATGGTGTGACCATGTTTTTTGTCATTTCAGGTTTTTTGATTACTCA11.5873015873015872No Hit
GCGACGGAACGGCGCGCATGCGCATCACGTCCCCCTCCATCTTCATCTCG11.5873015873015872No Hit
ACGATGGATACCAAGGAAAGCACTCCCATGACCACACCTTCGATGTACGA11.5873015873015872No Hit
GTGCATCGGCAGCTTCCTCAACGTCGTCATTCACCGCCTGCCACGCATGA11.5873015873015872No Hit
GTGTCAGCACGCCCTTCGTGCAGGACAACCATTCGATGTCCCGCAAGGGC11.5873015873015872No Hit
CTTCCGTGGATGTCAAGACCAGGTAAGGTTCTTCGCGTTGCATCGAATTA11.5873015873015872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)