FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCATTCTTCCCGCCGAGAGCGCTGGTGCTGGGCGCAGCGAATCTCAGCC46.349206349206349No Hit
GCGTAGTCTTGGCGTGAATACGCTTTCTCTGCGCGACTGAAGGCGACGCG46.349206349206349No Hit
CCGCCGCCCGCGTCGAGCTGCGCGACCTCTACCGCCTCTACCCGGACTTC34.761904761904762No Hit
GTACAGGACGTCTTCCACGGGGATGACGTAGACCGAGTTGCCTACGGCTG34.761904761904762No Hit
TGACGCTGCAGCACCGCAGCGCCATCGCCGCATTCGAGCAGGCGCGCCGC23.1746031746031744No Hit
AACAGGTTCAGCGCGGCGGCGACCAGTTCTTGCGGGCGGGCCTCTTTGCG23.1746031746031744No Hit
TTAACAGGGATAACAATTTCACGTAATCCTGATTCATCATTGTCCGCTTC23.1746031746031744No Hit
TCGTTGGCCACCAGCAGCAACTTTCCGTCCGGTGAAAATTCGATGGCTTC23.1746031746031744No Hit
CGTCCCAACTGGCCGACGCGCGGCTGGTGGAAAACAACTGGGTGTCGCTG23.1746031746031744No Hit
GTGAATCCGTATGTCTGGTTCGGGCTCACCACTGTCTGATAGTTGATCAA23.1746031746031744No Hit
GGCGTAGACGACCAGCACGTCGCAGTCGGGGCCGTTGGTGATCCACATCT23.1746031746031744No Hit
CCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTG23.1746031746031744No Hit
TGAAGTCGTAGCCGCTGGTGCCGTCGACGCCCCAGTCGGTGCGCATGGGT23.1746031746031744No Hit
GTGGAATCGCTGGCCACGCTCCGGCTGTATGGCATGGCAGAGGCGTTCGA11.5873015873015872No Hit
CCAATAACACCAGACACGGCATGATTCGAGCAAGACGACGGATATAAAAA11.5873015873015872No Hit
ATTCCCGCCAACAACGCCACCGGCACGATGCGCGACGTTGAGCACGTGGT11.5873015873015872No Hit
ATGTTGAAGGACTCGCTGAGCTTGGTGGCCTGCTGGGACTTGGTACGCAC11.5873015873015872No Hit
AGCGAACAGCATGTCGTAGTCGTACAGCGCCACGATGGCGCCCCACAGCG11.5873015873015872No Hit
GCCCACAAGAACCTGAAGCTGGACACCAGCCATGCCGTCGTGGCCCGCGT11.5873015873015872No Hit
GGGATTCAGCAGAGGGATCAGATCGTATAGCGTCACCGCGTGAGGTGTAA11.5873015873015872No Hit
ATTCCAAGACCCTTTACCTGCCGAAGACGGAATTCCAGATGCGCGCCGGC11.5873015873015872No Hit
GTGCCGATCACGGCCAGCATGTCGCTCTGCTCAAGGATGCGCGTCAGGAA11.5873015873015872No Hit
GTGCCATGGCAGGTCGCAAGCGCAGCAACAGCGTCAAGGAGGCGCTCAAG11.5873015873015872No Hit
TACTCCAACGCAACGCGCGGCAACATCGACGTACGCCTGAGCCTGGTCTG11.5873015873015872No Hit
CAGGCAATCTGCACCTGCCGCGTGAACGGATGCATGTCTGGCGCCAGACG11.5873015873015872No Hit
CTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCATCAGAAAGTGC11.5873015873015872No Hit
GGATGGCCCTGGCCGTGGTGCTGGCACTCGTGGCCGCCGTTCGCCCTGCT11.5873015873015872No Hit
GAACCTGGCGTTGGAGGGCGCCCGCAAGCTCGGCATCGCCCTGCCGAACA11.5873015873015872No Hit
GAAGCCCGGCGGAACCCAAAGTTGACGTTTATTCTCGGCCGAGAGACGGA11.5873015873015872No Hit
GGCCTGAACACGCGCCTGGACATGATCAATTCCGCCGGGCTGCTGCTGAT11.5873015873015872No Hit
GGTCATGATCGTGGCCGGGTTGCTGTTGACCAGGACCACCTTGAAGCCTT11.5873015873015872No Hit
GGATAGCGCAGGCCGATGGGCGCCTTGCAGGCCGAGCAACGCCCGCCCAG11.5873015873015872No Hit
CATCATGTGTGCCGCGCTGCTGACGGCCGAGCCGCTGGCGCTGAGCAACG11.5873015873015872No Hit
GTCGAGCGCGTGCTGGGCGCGCTGGCCCATGCCCAGGGCGACGCGCCGGC11.5873015873015872No Hit
GTGCTGCACCGGGTCGGCCACCGGCAGGGCGGCCACCCAGGCGACAGGGT11.5873015873015872No Hit
CTTAAAGCCGCGCAAGGATGGGCCCTACCGCGTTGAGACAGTTTTGGCAG11.5873015873015872No Hit
GGGATGTCCTCGCCGGCCAGCCCGCGCGGGTAGCCCGTGTCGTCCCAGCG11.5873015873015872No Hit
GCTTACACCGCTGATGGAGCGCATCGAAGCGGAGTTCGATGGCGTGAAGG11.5873015873015872No Hit
TATGGACACCGTCTTCAAGGACGGCACCGCACGCGCCAAGCCTTTTTACA11.5873015873015872No Hit
ATTGTGCACCCAACCTATCTCCCCGCAGGCGCTGTGCTTTAATGCGCTGC11.5873015873015872No Hit
TCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATC11.5873015873015872No Hit
GCGCGAGCAGGACCAGGGGTGCCGGGGAATCGGCTGCGATCCGCATGGCT11.5873015873015872No Hit
TCTTCATGTTTACCACTGGCAACCAGAACGCCGTTAGGTGTATTGAGTGT11.5873015873015872No Hit
ACCTCACCGTGCAGGTGAACTACGACCTCCTCTCGCCCAACAAGGGTGAC11.5873015873015872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)