FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003660644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length146
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAGTCTGGACGTCAGCTTCTGACACCGATGCCGCCGGCAGCGCCGAT311.11111111111111No Hit
GTCCGCCTGGCTTTTCGTTGCTCATCATGGCTCGCCACACGGCATGTGGA311.11111111111111No Hit
ATGCGGTTCAGCGGCGCGAACTCGCCCGCGGCGAACTCCGCCGCACCCTG27.4074074074074066No Hit
GTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCGTACGGGCGCGGCAGGCGT27.4074074074074066No Hit
ATCCAGTACGTCATCGGCGACCTGAAGGCCGACGCTACCCCGAGCGCCAG27.4074074074074066No Hit
ATTCTGGCTCAGTGGCTCATCAGCGGCCGCGGCGCTAACGCTACCGTGAA13.7037037037037033No Hit
GTCCAGGGGCGTGAAGGCAAATTCCCGCGGGGTGCCCCAGCGGCGCACTT13.7037037037037033No Hit
GTTCATACCAATACAGGGTTCGTACCAGCACAAGCCGCCTCAGTATCAGA13.7037037037037033No Hit
CACGCGAACCGCGCCGATCGCGCCGACGTCACCAAGGCCGACGTGCGTCC13.7037037037037033No Hit
GAGCGCACTCGGTCTCGTGCAGTTGACGTTCGGCGTCAACTACCTCAGCG13.7037037037037033No Hit
TTCCCGTAGGCTGAATGCCGGAGAGAACTCGTGCTTTCATGAAAACACCA13.7037037037037033No Hit
CTACTGATGGCACCAAAATGAATCAATGACCTCTGGCAAGAAGAGCTTAG13.7037037037037033No Hit
GAGTGTTACTGCACCAGCGCGGCCACGTGGAGGTAAGCCTGTCTCTTATA13.7037037037037033No Hit
ACGTCTTCATCTGTCTCAGTAACCAAGTCTACTGCGTTTGCCTTCTGTAT13.7037037037037033No Hit
ATCTTGTACCGCTTGTTCGGCATAGGCTTGGCGTTCACTGTTGATGGTGG13.7037037037037033No Hit
GCCTGACGCCATACGGTTTCGGACTGCGGCTCAACGCCGGAGGTACCGCA13.7037037037037033No Hit
GCCGGAAGGCGTTGAAATGGTAATGCCAGGTGACAACATTCAGATGACTG13.7037037037037033No Hit
CACCGGCACGCTGTCGATCGCCATGATGTCGTCCACCGCGTCGAGGCCGG13.7037037037037033No Hit
ATGCGGTTCAGCGGCGCGAACTCGCCCGCGGCGAACTCGCCGCACCCGGC13.7037037037037033No Hit
GCCTATTCCTGCCTAGTCGCCGAAGTCTGCTCTTCGGCGCTCGGCCCTCT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)