FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003660869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCAAACTCTTTGGTTCAAGAGATCCTCCCACCTCAGCCCAGCAAGTA313.043478260869565No Hit
GCTTCTGCCGTGATGCCTTCGATGCGGCGCTTGGCTTCTGCCATGCCTTC313.043478260869565No Hit
TGCCAGCGGTGCGATCTGCGCGGCGGTATTCGCGACGCCGAGCGAGAGAT313.043478260869565No Hit
CTCGATGTCGTCCTCGCAGGCGGTCAGCATCAGGATCGGCACATCGGAGA28.695652173913043No Hit
GTAGATCTCGGTGTCGCGTACCCATGTACTCCTGTCTCTTATACACATCT28.695652173913043No Hit
ATCACGCTGAACCTGCCGCTCGTCTCGGCGGCCATGGACACCGTGACNGA14.3478260869565215No Hit
CACTTCGGCTGCAAGCCCGGCTACCTGGGTCCGCTGAACCTGAAGAAGCC14.3478260869565215No Hit
GTCCAGGCCGACGCCCATTGCCAACGGCCTGGTCTACGTGAACCCCGACA14.3478260869565215No Hit
GTGGAGAAGTCGTGCGCGGGCGCGCCGAGCGCGTCCGGGCCGCCATGGGT14.3478260869565215No Hit
CGACATAAGAAAGCTGAAATAACACTGGTTGACCGTAATCAGACCCACTT14.3478260869565215No Hit
GAGGTCAGTTTAGGCGGTGAGGTGGGTCGCCTCAAGGCTGTCACGCTCCG14.3478260869565215No Hit
TCGATACCTTCGGCGGCGGCCTTGAACCGCTCGTACTCCTGCAGCCGGCG14.3478260869565215No Hit
GGGTGGCCTATCAGCCGCAATCTACAACGAAGTAATGCAGTTCTTCGTTA14.3478260869565215No Hit
GGCCACCTCCCATCCTTCCGCAGATCTTTGGTGTCCCTGATGACCAATCC14.3478260869565215No Hit
CGCGCGTGTCGAGCGCCTGCTGTTCCGCGACTTCCCCGGTCTGCACGGCT14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)