FastQCFastQC Report
Tue 10 May 2022
EGAF00003660886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84151
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC1840.2186545614431201No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT1530.18181602119998574No Hit
CAATTGATATTAGATATTTTTGCAAAGCGGGCGAGAACGAGAGAAGGCAA1270.1509191809960666No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC1210.14378914094900833No Hit
GTATCGGCTTCTATGGCGAATGACAGTGGAAAGCTGTGTGTTGATTTCAT1180.1402241209254792No Hit
GTATGAGGCTGTATGCAAAATCCAGAGGGGGGCAGAGATGGAGGGGGCAA1050.12477570082351963No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC1040.12358736081567658No Hit
GTACTAGGCATCGTCATCCAATTCGACGAGTCCTACACTATCTTGGATAT1030.12239902080783352No Hit
CCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTTGA1020.12121068079999049No Hit
GTATATACCAGTAGTGAAGCCCTCAATGCCCGAAACCACTGCACTGGGTG980.11645732076861832No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC960.11408064075293223No Hit
GCAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCCCGGC960.11408064075293223No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT920.10932728072156005No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG850.10100890066665874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)