FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGTAGGCGATGCGCGCCACGTCGCCGAGCTGGCCCTGCACCTGGTTGA47.017543859649122No Hit
AGGCGCCGTTGGCTTCGCGCCAACGCACCACCGCCTTCGCCACGCTGGAC35.263157894736842No Hit
AGGCTCCGCGGCGCTGCCGTATCGTTCCGCCTGGGCGGGATTCTGACTTA35.263157894736842No Hit
GCTTGCCGTTGTTCTCTGAGCTCCTGCTCCAGTATCCTTCTTCCTGTCCC23.508771929824561No Hit
GTCTGTGGTTGCGGCTTCTTGAGAAGGGTCAGCCATGTGCTTGGGCCCTT23.508771929824561No Hit
TCATTGAATGGAATGGAATGGAATCATCAAAGAAAGGAATCGAAGGGAAT23.508771929824561No Hit
AACCAGAATAGGAAAGACAAATACAAAACATTTAATAAGATGGGAGGCTT23.508771929824561No Hit
GGAGGCACATATCCAAGCGACAGCAGCAGGAGCGAGCGTGTCACTGCAAA23.508771929824561No Hit
TTTTAGTAGAGATGGTGTTTCACCATATTGGCCAGGCTGGTCTCGAACTC23.508771929824561No Hit
CCTCCGAGCTGTTTGTCATCGAGCCCCAAGGAGCCCTTGGCACCTAGTAG11.7543859649122806No Hit
CTTTGTAGTAATCCTGAATGAGCGTTCACTCATGATTTGGCTCTCTGTTT11.7543859649122806No Hit
GTCTTTTTAAGCATCTGCCCAGATTTCAAAATGCAGGCTGCATCTTTTCT11.7543859649122806No Hit
ATTCCATTCCATTCCGTTCCGTTCACATCAATTCCTTGCGATTCCATTAC11.7543859649122806No Hit
CTACATAAAAGAAAAAATGGGAATGGCAGTTGAGCATGATGATTAGGAGC11.7543859649122806No Hit
GATGAAACTCACTATCCTGAGCTTCTGAGAAGAGAAGCTTACCATCTCCA11.7543859649122806No Hit
TCTGCACGGCGGTGGCGGCCACGCGCAGCGGGCGCTCGGGGCGGCCCTAG11.7543859649122806No Hit
TACCCAAGGAGTTCGGCATGGTTTTTCGAGGTGGACGCAGAGGGCGGCCG11.7543859649122806No Hit
ATTCCAGAGCATGGAGAAAAAGCATGAACAGTCACCCCAGACTGGGGACC11.7543859649122806No Hit
GTACTACGACGCCGAGTTCCGCGCGCTCGCCGAACAGCACGCCAACTTCA11.7543859649122806No Hit
GGAGAAGCACACCTGCCTGCCTGGCACCTCTGGGAAGCCTCACTGCAGCC11.7543859649122806No Hit
CTCCTTTACAGTTGTAAAAAATGATGGTCTGCAAAGTCTTGGTTTGGACT11.7543859649122806No Hit
TGCTCAAGGTCACCACCCGCGCGGCCATCAGTAAGCAGGTCAAACAGCAC11.7543859649122806No Hit
ATTCCATTCATGTCGATTTGGTGATTCCATTTGACTTCATTTGATGATGA11.7543859649122806No Hit
TTACCGCACTGGACGCCTCGCGGCGCCCATCTCCGCCACTCCGGATTCGG11.7543859649122806No Hit
GATCCAGAGCTAAGCCGATACAGTCATAACCGGGACCGAGGTTCGCAGAA11.7543859649122806No Hit
GATATAGACAGCAGGACGGTGGCCATGGAAGTCGGAATCCGCTAAGGAGT11.7543859649122806No Hit
GTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTGACGCGCAT11.7543859649122806No Hit
CCTTCCTAACATTGAGTTGCACCCTTTTGCCTCAATTTGGCAAGTAACTC11.7543859649122806No Hit
AAAATAAAAGGTTTAGCCAAAATCAATAGGTATTTCAAGAAATCATTTTG11.7543859649122806No Hit
ATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCT11.7543859649122806No Hit
GGCCAGCCTTGCCCTGCACAGCGGCGAATGCGTGGGGCTCATCGGCCCCA11.7543859649122806No Hit
TCCAGCATGTGTGAGCCTAGCCTTCTCTCAGTAATTCCAGGGAGGGAGGC11.7543859649122806No Hit
GGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGC11.7543859649122806No Hit
AACTAAGAGAATCTAAATGCCAGGAAGAGTTGGCCCTTACCATAATACAT11.7543859649122806No Hit
ATCCAGGGTTCAACTCCGGCGCTGCGCCATCCATGGCGCGCTTACCACAG11.7543859649122806No Hit
CTCAAGTGTGTCCTGTTTTCTCCTCCCATGTTATTAACAGTCCATCTCTT11.7543859649122806No Hit
GTCCCGCTGGGCCAGGACGTGAACCCGAGCGTGATCGCCCGCGGCACGCC11.7543859649122806No Hit
CACTTGCACATTCCACAACAAGAGTGTTTCCAAACTGCTCTATCAATAGG11.7543859649122806No Hit
CTTGCCGCCCGTCTCCAGCTCCATGCTGATCTCGTAGTTGCGCGTGGTGG11.7543859649122806No Hit
GTCGTGTGGAACTAGAGCCCGGCCAGAGGCAGACGGTCACCGTCGCGCTG11.7543859649122806No Hit
GTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAACA11.7543859649122806No Hit
GTGGGTCACAGATCTTGCTGCCTTCTTGAGTCTGTATTCCTCTCCAAAGC11.7543859649122806No Hit
GGGTAAATCCCCCTTATTATATCCTTGTCCACTCATTTACGAAGTGCTCG11.7543859649122806No Hit
GACCCCTTTTCTGATCGTCTCGGCCCCTCTGATTGTTCCCGATGGTCTCT11.7543859649122806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)