FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003660998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003660998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTCGGTGGGCGATGCGGCCAACGGCCAGTACCGCCAGATCACCGGCGT47.017543859649122No Hit
CTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGAACCG35.263157894736842No Hit
CACAGGGACAACATCGGCGTTGCCAGCAATCATGCGGGTCGCCGCCAGAG23.508771929824561No Hit
GATTACAGGAATGAGCCACTGCACCTGGTGTAAGCCTCCCATCTTATTAA23.508771929824561No Hit
TGCTGGTACTGGCCCACGCCGATGCTCTGAAGGTCGACAAGGTGGTGGTG23.508771929824561No Hit
GGGTTCCTAGGGGAGGACGGCAGGGCTGGAGGGGACCCAAAACAAAGCCC23.508771929824561No Hit
CCATTCGAGTCCATTCGATGATTCCACTCGATTCCATTAGATGATTCCAT23.508771929824561No Hit
GGATTACAGGCATGAGCCACCACACCACTTGGTTCATCCCCTTTTTTTTT23.508771929824561No Hit
CTTTGGGAGGCTGAGGGGGGCAGATCACGAGGTCAGGAGTTTGAGACCAG23.508771929824561No Hit
GGGAGGTGGAGCACGAGCGCACGTGTTAGGACCCGAAAGATGGTGAACTA11.7543859649122806No Hit
GCGAAGCACGGCCTGAAGGCGCTGGCGCGCATCCGCTCGTTCGCGACGGT11.7543859649122806No Hit
ATTAGGGCCCTATTAAGGGCAAGCTGTCCCTCCTGGTGTAGGGTAGGGGA11.7543859649122806No Hit
TTATGATAGGATAGTAAGTTCCATATTGCAATAAATTAAGTAGCAGAAGG11.7543859649122806No Hit
TTAAAAAGATATTTATTGGGCATGATGGAGGGATGTAAGAAGAGGACAAG11.7543859649122806No Hit
GTACTGCAATGCTTCCAGCATTGGGATCAGATGAAGTAGGCCGTTATCTG11.7543859649122806No Hit
GCGCTGACCTGTCTTCTTTCATATGCTGCCTACGGCATAGCTCCGTAGGG11.7543859649122806No Hit
CGTCACGGTAACTGGAAACGGTCTGAAGGACATTGACACTGCATTGAGTC11.7543859649122806No Hit
AATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTT11.7543859649122806No Hit
GGGGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGAC11.7543859649122806No Hit
GAGCAAGCCCTGCTCACACTCTCACACTCGCACCCAGAATTGTCAAAGAT11.7543859649122806No Hit
TGCTGGTACTGGCCCACCCCGATGCTCTGAAGGACGACAAGGTTCAGGTG11.7543859649122806No Hit
GCGCGGGCCCGGGTGGAGCCGCCGCAGGTGCAGATCTTGGTGGTAGTAGC11.7543859649122806No Hit
CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCA11.7543859649122806No Hit
CCGCAGTAGTTTGTGCTGTTTGACCTGCTTACTGATGGCCGCGCGGGTGG11.7543859649122806No Hit
ATGTCCTGCGGATTCAAGAAGAAAGATGTTGAGTTCAACTGGAAAGTGAG11.7543859649122806No Hit
TCCTTGGCCTTCTCGAAGTCCTGCATCTCGACCACGCGCGCATTGCGGCG11.7543859649122806No Hit
TGTTTGTATTCAACTCCCAGATTTGAACTTTCCTTTGGAAAGAGCAGCTA11.7543859649122806No Hit
TTCCAGGCCATTGGAGGGCTTCCCAGATGGAAAGAGTTCAGATGCAACAA11.7543859649122806No Hit
GTGCCGAGCAACCCCGGCCGCCCTCTGCGTCCACCTCGAAAAACCATGCC11.7543859649122806No Hit
GCCCACCAGAGCCTGAGCAGGGGCAGACTCCCAGGCCCCGGGTAGCCCAG11.7543859649122806No Hit
TCATTGAATGGAATCGAATGGAATCATCTAATGTACTCGAATGGAATCAC11.7543859649122806No Hit
GCTGGAGACTGTGAGCTTTTCTTCCAATAAAGTGGAGATGGTGAGTGTCT11.7543859649122806No Hit
TCGTGCGAGAGCGCCGGCACGTACGTGAAGTTGGCGTGCTGTTCGGCGAG11.7543859649122806No Hit
GGTCTGAAAAATATCCTATTGGCTGTTGGCTCTTGCTCATGCTCTTATGA11.7543859649122806No Hit
CTCGCGCACCGTGAAATCAAAGCTCTGCGGCGCCTCCTGCGCCAGGACCG11.7543859649122806No Hit
CTTACCTCTCATTGGTTCAGGCAATTGGTTTGTTGGTTGACTGCAAGGAT11.7543859649122806No Hit
GTTGTAGCCATTGGGAAGGGGCCTCAGCCCTCAAGTGGTGAGACAGGGCA11.7543859649122806No Hit
CCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAA11.7543859649122806No Hit
GGTGAACAAATTAACATGTATTATTGCATATGGCCATTGCTACAACTGTT11.7543859649122806No Hit
GCATTTTCTGCAATAACGGAGCTTCTGCGGGAAGCTCCTGCTTCTAGAGG11.7543859649122806No Hit
GTCTCAGGATACAAAATCAATGTTCAAAAATCACAAGCATTCCTACACAC11.7543859649122806No Hit
CTCTTGGAGTAGTTTCCCATGAAAACCATTTATCAAGAAAAATAGATCAA11.7543859649122806No Hit
GGTACGGACTCCAATGGAATGGAATCGAATGGAAGGGAATCGAACGGAAT11.7543859649122806No Hit
TCTTTATTCCCTTCCCAGTTTAACCTCTCCCTCTTGGATTCAGCATCACC11.7543859649122806No Hit
AACTGCAACAGCAACTGCAACTGCAACTGCAACGGCGGCACCTGCCGGCC11.7543859649122806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)