FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGAC46.896551724137931No Hit
GACGCGCACCGAGCACGACGGCACGATCACCGTGCTGGCCTCGCACTGGA35.172413793103448No Hit
CTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTG35.172413793103448No Hit
CATCAAGGCGATCCACCTGCAGCTGGACAAGGCCATCGACTTCCAGGCGG35.172413793103448No Hit
ACCTTGGTCTGTAAGTCACACAGCTGGGATGTGAAGCCTGGCTCGGATTC23.4482758620689653No Hit
GTCTTGAACTCCTCGGCTCAAGCAATTCTCCCTCCTCGGCCTCCCAAGGG23.4482758620689653No Hit
CTTATAAAGAAAACAGGTTTAATTGACTCACAGTTCTGCAGGCTGTACAG23.4482758620689653No Hit
GAATGGAAGGGAATGAAATCGAGTGGAATGGAAAGGAATGGAATCAACCC23.4482758620689653No Hit
GCTGATGCCTGCGCTCGATGCCTACGACGCGAGCATCCGAGCCATGGTGG23.4482758620689653No Hit
ATATTCGATTCCATTCCACTCGAATCCATTCCATTAGAGGACATTCCATT11.7241379310344827No Hit
ATTGTAGACTGTCACAAAGAGAGAGGAAGATTTCTAGGAAGATAAGTCAT11.7241379310344827No Hit
CATGAGCCACCATGCCCAGCCAAATGCACGGATCTTAAGTGTGCAGCTCA11.7241379310344827No Hit
GTGAATGATAATGCAAGCTGGTAATGTGTTAATAACTATTAAGTCTAGAT11.7241379310344827No Hit
TTGTAGATATGTGGCGTTATTTCTAAGGGCTCTGCTCTGTTCCATTGATC11.7241379310344827No Hit
ACGTAAGAGTGCACAGATTGGTAAATGTTTTTTAAAGCTTATTTATTTTC11.7241379310344827No Hit
GCGCGGCAGCAGCGGCCGGATGTCGGCGCGCTGGCGCCAGATGGACGGCA11.7241379310344827No Hit
TCTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAG11.7241379310344827No Hit
ACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGG11.7241379310344827No Hit
GAGCATGGCCACGCGGCTGCACAGCGCCTCGGCCTCTTCCAGGTAATGGG11.7241379310344827No Hit
GGAGCAGACAAGATGGAGCTGGCCAAGGGGAAAGTTCATTTGCATAATAA11.7241379310344827No Hit
CCCACGAAGTTATATACGATGAGACATTACTCCCTGTGAAAAAGATTCTT11.7241379310344827No Hit
CCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGAC11.7241379310344827No Hit
CTATCAATGTCCAAAGATGAACATTGAGGCTGTTGTTGTTATTGCTGTTT11.7241379310344827No Hit
TCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATT11.7241379310344827No Hit
GCCCGCGGTGAAGAACTGGTTCACCGTCACCACGATGCGTCGCTCACGTC11.7241379310344827No Hit
CTATTACTCAGGCCATTTTATAGAAGAGAAAACTGAGTCTAAGAAATTTA11.7241379310344827No Hit
CATTTAAGTCTTAGATCCATCCTGAGTTAATTTTTGTATAAGGTGTAAGG11.7241379310344827No Hit
AACCTATACCAGCCCTCCTTAAAATCTACACTCAAAAAAGTAAGGCCCAA11.7241379310344827No Hit
GGATATACGCGACACCGAGATCTACCTCTGTCCCAAGTTCTGCAGGTACC11.7241379310344827No Hit
ACTCTTGGGTGACAGCTTGAGGAATGATGCTCATGAACTGCACAAAAAAA11.7241379310344827No Hit
GTAAAGTACTGTGTAGATTCTAGGATTTTACCCTTTTTACAAATAAGATG11.7241379310344827No Hit
CACCACTCCACACCGAGTTGTACGGGTTCATCCGTTCCCCGGTGGCCGAA11.7241379310344827No Hit
GCGATAGTCGTAGAAGCAATAGTTGGCGAGACAACAACGATGCTACGATG11.7241379310344827No Hit
CGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGG11.7241379310344827No Hit
TATGAACCCTTTCCCTTATGTTTTCTCCCAAGGCTTTTATTGTTTTTGCT11.7241379310344827No Hit
ACTCTTGGGTGACAGCTTGAGGAATGATGCTCATGAACTTCACAAAAAAA11.7241379310344827No Hit
CCCTAATATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAAAAACTTCA11.7241379310344827No Hit
ATTTCCCTCTAAACACTGCTTTAGCTGTGTACTCGAGATTCTGGTATGTT11.7241379310344827No Hit
GTCAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGA11.7241379310344827No Hit
CTTGTTGCCCAGGCTGGAGTGCAATGTCGCGATCTTGGCTCACTGCAACC11.7241379310344827No Hit
GTGTAAGGAAGGGATTCAGTTTCAATCTTCTGCATATGGCTAGCCAGTTA11.7241379310344827No Hit
AACAGTGCGCTGAGCTACCTTCAGAGCCCCATTACGACCTCTCCCAGCTG11.7241379310344827No Hit
ACCCTGTTTCTACCAAAATACAAAAATTAGCCGGGTGTGGTGGCGGGCAC11.7241379310344827No Hit
TCTCGATCTCGATACTGGTGAAGCCCGCGCGGCTCACATCGCTGCGGATC11.7241379310344827No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)