FastQCFastQC Report
Tue 10 May 2022
EGAF00003661044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences962062
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCTATAGAGCTCACACCCATACTCCCAGCTGGGACCCAGCCTTCCCTG33620.3494577272566633No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG18790.1953096577975224No Hit
GTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGG15200.1579939754402523No Hit
CTCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTT11940.12410842544451398No Hit
TCCTGAGAGTGCCCATCGGCTGAAGTCAAGCATCGGGCTGATCAATGAAA11260.1170402739116606No Hit
GAGTATAAGTTGGTCACCTTTGGTGTAAAACTGAGCTTCCGAGCTGGCTT11050.11485746240886763No Hit
GTCCTCCCCGCGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGT9940.10331974446553341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)