FastQCFastQC Report
Tue 10 May 2022
EGAF00003661046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences977773
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCTATAGAGCTCACACCCATACTCCCAGCTGGGACCCAGCCTTCCCTG32830.33576300429649825No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG18200.18613727317076662No Hit
GTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGG15400.15750076960603332No Hit
CTCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTT12010.1228301456473026No Hit
TCCTGAGAGTGCCCATCGGCTGAAGTCAAGCATCGGGCTGATCAATGAAA11600.11863694333960952No Hit
GAGTATAAGTTGGTCACCTTTGGTGTAAAACTGAGCTTCCGAGCTGGCTT11010.11260282294561212No Hit
GTCCTCCCCGCGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGT10110.1033982325140907No Hit
GTCCTGAGTTAGGATCTTCACGATCTGGGTAGATCCCAGCTTATCTGCAG10040.10268231992497236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)