FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAGCAAGTAGCTGGCGCTCGTCCCGAATACGGTCATCTTCGTATCTTC35.084745762711865No Hit
GTCGTAAGCGCTTTCAGAAGGATGTTTTTGCGGGGATTGTAAATCAATGT35.084745762711865No Hit
GCGTTCAAAAGGAAGCTGAAAATCCGGAACGAACCATTGAATGATCATGA35.084745762711865No Hit
CGGTGATACGATTCTTGTTCCTGATCCGGGTTATACGGCCTATGAGGCGG23.389830508474576No Hit
GAGTACGTCTTTGGCCAGGGCGGTGGAGAGAAGCTAAGCCAGGAGCTGAA23.389830508474576No Hit
ACGCACCGTTGAAGGGCTCACCTCGATCCCTTCATGTTTGGCTAACAGTT23.389830508474576No Hit
TTACCGAGAATATGCTGAAGCCGGTCGCCACGCTCAGTGATCCAGACCAC23.389830508474576No Hit
GCCATTCATGATTTAATCCGATACGGTCGGGAGGATCCCGCCTGGATGGA23.389830508474576No Hit
GGGTTCGAATTCCTTTAGAAAGACCAGTGGGGTGGTCTATAAAAACCTTA23.389830508474576No Hit
GGTTAAGGAGGTGCCGTAATGAAATTGCATGAGCTTCATCCTGCAGAAGG23.389830508474576No Hit
ATATTGGGATGCTTTGGGCGACGATCATCGAACAGAATTGATGAAGTGAG23.389830508474576No Hit
GTATCAACCGGAATACCGAAAAATCCGTGAAAAATATTCGTTGTTCGAAA23.389830508474576No Hit
ATCCTTGTGTATGAAGCGCTACGGCAACAGGGCTACCCCAATTTGAGTTA23.389830508474576No Hit
TCATCATCCCGTTCATCCGGTTGGCGGAGCGGGATTTGTCCAAGCACCTT11.694915254237288No Hit
GATCACCGGTTTCCATCACCTGTTTGGCGGTTTCCGCGACGTCCGGTTCC11.694915254237288No Hit
GTAGAAGGAGGCTCCGCAGCTGAGTCTTTTCATAACAGCCTCGATTTGGC11.694915254237288No Hit
GGTTACCCGCGACAGGACGGAAAGACCCCATGGAGCTTGACTGCAACCTG11.694915254237288No Hit
TACATCCACTCGTGTTTTGAGCGGGATGATTTGTTTTTGTTCTGTGACTT11.694915254237288No Hit
GGCTATGACAAAGGAAAAACACTCGACCCTGTCACAGACACCCACTATTC11.694915254237288No Hit
CGGCCAAACAGGCCGTTTTCCCCTGCATGCGGGTTGATTCCGCAAACGGC11.694915254237288No Hit
ATCCGGCCCAAACACCTCTGCAGGCATGCAATAGGTACAGCGAAAATTGC11.694915254237288No Hit
GGTATTCATCTGAATTTATTGGCTTTGCGATTGACCTTGCCCTTGACCGC11.694915254237288No Hit
CCCGAATAACGTAAAGGTTAATCCGATCGGCAGTGCATACGGAGAAGGTT11.694915254237288No Hit
TTAACTGATTCGGAAAAAAACGTTTACCGTCATTCCGTTCTACGACAAAG11.694915254237288No Hit
GTTAAAGACTTATGAGGCTTAAGTTAGTTTAAAAATGGAGGCCATGCTTA11.694915254237288No Hit
TCAAGCGAGCGGCTGTGCGGAAATACGTTTTGTTCCATACCGATGATGAA11.694915254237288No Hit
GAACAACCGATCAAGCGAGCACAACGCGGCCGCCCGAAGAAGGATGAAGC11.694915254237288No Hit
CTTCCAAGGAGGGATGATCATGGCGAAGAAAATGCCGGAAATCGGTGAAT11.694915254237288No Hit
CCCTGCGCGTGCACCTCGAGGATCTTCGCGCGGCCCTCCAGGTCCGGGGC11.694915254237288No Hit
GGCTTGCTTTCTACAAAGGCGGTGATGGTGGAGTGCCCCAGTTGCGGCAA11.694915254237288No Hit
CGACAGGGACACATGCTTATAAGAAAGGAATCATATGGCTCTGTATCCTC11.694915254237288No Hit
CTGGTTAATCGTCGGCTTCATTGCCGTATCCACCCTTGTATTTGTATTAG11.694915254237288No Hit
CCGACGTGGTCGAGATCAGTACTTTCCTGGTCAACATGAACGACTTCGGT11.694915254237288No Hit
GTGAAAAGCTGCTTGATATGTCTCTCGATCACGCAATGACCCGCGAACAG11.694915254237288No Hit
ATGCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCA11.694915254237288No Hit
GCTTTGGGAACATTGCGTCAGCAAATCGTATCGTTTCGGTGGTTAGTCCG11.694915254237288No Hit
GTTTATATTTCCGAGGAGTTTTCGGCGAACAAAAGGGGACGATTACTCGG11.694915254237288No Hit
ATGTGAAGCGGGTAAATGCTTCTTGCAATTTTATAGTTTCAGGTGATTCT11.694915254237288No Hit
GTAAGGTTTCGGGGGGAGTGATGTTCCCAGGGGTCATTAATGAACTGACG11.694915254237288No Hit
GTCCTCACCGTGTACAGGTCTTTTACACCCCCCGGCCAAACCATTGAAGG11.694915254237288No Hit
TCACAATCCACAGCCACTCGGTATCCTTCCTGATAATATTGTTCAGCCAC11.694915254237288No Hit
CATTTCCGCTTCCGCCTTGACAGCTCAACGGTTACGGATGGACGTCATTG11.694915254237288No Hit
GTTATCAATATGTGGTGGAAACGTATCCGAATACGGAAACGGCATCAATT11.694915254237288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)