FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACAATCCACAGCCACTCGGTATCCTTCCTGATAATATTGTTCAGCCAC35.454545454545454No Hit
GGTTACCCGCGACAGGACGGAAAGACCCCATGGAGCTTGACTGCAACCTG23.6363636363636362No Hit
TCACCATGCTCACTCGGCAGGCGCGCCGCGGGCTGTCCCGGGCGACGAGG23.6363636363636362No Hit
GTAAGGCCATCGACTCCTTTGCGAAAGGGAAGAACAAAAACGAAACGCCC23.6363636363636362No Hit
GGTCCACGCCGCGCGCGGCCAGCTCCTTGGCGATCACCGCGCGCACCTTG23.6363636363636362No Hit
GTATGTGAACCGTGTAGCCCCATTTTCTTTTCCTTGCTTCCTACATGAAA23.6363636363636362No Hit
GTGTGCGTCGGGCTGCTGGTCGGCCTGCTGAACGGCTCGCTGATCGCGAT23.6363636363636362No Hit
TGAACACATCGAAAGTCGTACCTTCCGAATGGGGATTCACATTTGTCGCC23.6363636363636362No Hit
CAACATACTCTTCACGTCCACGGAGCGCGTACGGTCGAGACTGCCGACGA23.6363636363636362No Hit
GATTTCCACACCGTGGTTCGGGCACACCGGATGCCCGACGCGGGCAAACA11.8181818181818181No Hit
GTAGAAGGAGGCTCCGCAGCTGAGTCTTTTCATAACAGCCTCGATTTGGC11.8181818181818181No Hit
GTAAAAGAGTTGGGTGAAAATCAAAAGGGAATGCAACAAGACATTAAGGA11.8181818181818181No Hit
GTCCCAGACATGGTTGCGGCTGTGCGGATCAAGCCCGGTAGTCTGCACGT11.8181818181818181No Hit
ATTTAAGCCAATATGAAAAAGATAACTGCCCAGTAACCCCGCAGCTGCAA11.8181818181818181No Hit
CATCACAATCGTGCACCCTGCCGCAACAGCCGGGGCGGCTTTGCGTGTAA11.8181818181818181No Hit
GCATAACGAGTCTATGAAGGACCAAGGAATGGCACTCGATGTGACGGACG11.8181818181818181No Hit
ATAACGCCCCGTTCCAAAGCTACGTATTGGTTAGCAATAGTTGTTTCTAC11.8181818181818181No Hit
TTAACTGATTCGGAAAAAAACGTTTACCGTCATTCCGTTCTACGACAAAG11.8181818181818181No Hit
ACACATGAGTTGTTGCTTGAAAAGACGACGCATGTGCGGGACAAAATCGA11.8181818181818181No Hit
ATGCAATTCCGTACGGTGAGGTACGCAATTACACCGATGTTGCCCTTGCG11.8181818181818181No Hit
GTTTCAAAGCATGCAAGACATGTTGCCGAAAGAGATGTATGAGCGGTTTT11.8181818181818181No Hit
CAATATAGCATACTCGATGCTGTGTTGTTTGAGTTCTAATCTCTAACCTC11.8181818181818181No Hit
TCCATGTACCGTGGCGCTTGGAAAGACGTTCGCCGTCCGGACCATAAAGC11.8181818181818181No Hit
ACGCACCGTTGAAGGGCTCACCTCGATCCCTTCATGTTTGGCTAACAGTT11.8181818181818181No Hit
GCAGAGCGCCGTGTGGCTCCCCCAGGAGGACCGACGGCTATTTTCTTGCC11.8181818181818181No Hit
GAAAACGCCTTTCAAGAAAGGCGCCATCCGTCGCAAACAATCGGAATTTG11.8181818181818181No Hit
ACACATGAGCTGTTGCTTGAAAAGACGACGCATGTGCGGGACAAAATCGA11.8181818181818181No Hit
GTAGCCAGTCACCGACCAGCTCCACCGGACCACGGTGCTCCAGATGACGC11.8181818181818181No Hit
GTATTATCATGGAACCGATCATCACCGGTGGAGGTGTCATTGTTCCGCCT11.8181818181818181No Hit
TTATTCTTGTCATCGGTTTGTCACCGTTGATCGAATCGACAAGCGGGTTC11.8181818181818181No Hit
AACAATAGCAGCTCTTCAGCCGGACCGACGACCAGGCGCTCCAACTTTTC11.8181818181818181No Hit
CCAGCCCAGGCTTTAACAGCGCATTATATTTCTCCCGTGTTAACTCCGGT11.8181818181818181No Hit
ACCTGAACCTGCGCCGCGATGACGTCGCCAACGAGGTCGTCTACATGGTC11.8181818181818181No Hit
GCGGACACTCTTTATCAGGTGCCTCTTGATCTTCAAAAACAGCATCTCGA11.8181818181818181No Hit
GTATGGTTTACATGATCAAAGAATCCCTGAATATCCACATCCACGACATA11.8181818181818181No Hit
TGACAAGCCGCTGAGAAGCACGGCGACATTCGAGCCAAAGCGCCCATTAA11.8181818181818181No Hit
GCATGCTGTCGAGAAATTTCTGGTTGATTTTTTTTGTCGTAAAAACAAGC11.8181818181818181No Hit
TCGCGAAGGCGGTGCCCAATCCGAGGAGCATGTTCTGCAACCGCAGCGTC11.8181818181818181No Hit
GATAAAGCGCTGGCAGTTAAAGTATTGGAGTAAGGTTGTTTTTCTTATTT11.8181818181818181No Hit
CTTTCAAGCTATGCAAAGGTGAACAAATTCGGTTTTATTGAAACCCCGTA11.8181818181818181No Hit
GGTTTACGAGTCTATGAAGGACCAAGGAATGGCACTCGATGTGACGGACG11.8181818181818181No Hit
GTATAAAACCACCCGTCATGAAAGGATTTTTCCGTAGCTTCAGGATTGTT11.8181818181818181No Hit
TTGCGCACGGTTCCCTCAAGTTCCATACCTATCTGCAAATCCTCTAATTG11.8181818181818181No Hit
ATCCATTCTCGACAATTTTAACAGGTCGTTGACAAGACGGATCATCCGCT11.8181818181818181No Hit
ACTGCCCCGTGCCTTCAGCCATACGCCCTTTTCGACAGCCTGAAGCTTCG11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)