FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATGGTTCAAAGCGGTACCTGGGCATTCCTGCTGTATTGGACCGAGTTG35.454545454545454No Hit
GCCTTTGCTTTGACGGAACCTCAGGCTGGTTCAAACGCTGCGAATTTGAA23.6363636363636362No Hit
TTCTCCCACATCGTGCCGTCTTTTTTCTTCCCGCGATAGACCTTCTTTCC23.6363636363636362No Hit
GTTTTTGTACCTTGAAGCCCTTGAGGTTCCGCAAAAAATCGAAAGATGGC23.6363636363636362No Hit
CCCCAGCAGTGCCACCGGATCACTAAGCCCGACTTTCGTCCCTGCTCGAG23.6363636363636362No Hit
GCCGTCACGGTGCCGGCGATGCCGCTCAGGAGGCCCGCGATCGCGTAGAC23.6363636363636362No Hit
GGCCAGCACAAAGACCATCGCGGTCAATGGCAAGCTTATCCAGAAGCGTC23.6363636363636362No Hit
TTTCCTCTCCTATGAACCGGATTATTGTATCATGACAAACATTGACTTTG23.6363636363636362No Hit
CAATGGCATCCATGCCGCGAACCGCCTCAAACAATTTCTCATCCTCTTCC23.6363636363636362No Hit
AAATAAAGACCGGGAGGCTGACAATCGCACTCCCCGTTCCCATTTCCTCA11.8181818181818181No Hit
ATTCAAAAGGAAAAGGCACAAAAAAAAGCGGAACAACAACAGCCAACGGA11.8181818181818181No Hit
GTGCATCGGCTTTTTACGGATCATTGATGGCGGACAGCCGCTTGACCGTA11.8181818181818181No Hit
CAACGACGTCATGTGCCTGGACGTGGATTCCGCCAAGATCGCGCTGTTGC11.8181818181818181No Hit
GAGAAATGAAGTCCAGTATGCGGCGGATTTTCTGTTATGGTACGCGGAAG11.8181818181818181No Hit
AGTATGGGCCGTTTGGGGTATGCTCTCTCCCATGAAAAAATGGCTCCTCC11.8181818181818181No Hit
CACCGCAGTCGCTGACAACGGCATGTACGCACTCGTAATCCCCTTCGCCA11.8181818181818181No Hit
GGATTTCCTTTGCCCCGTCCAGAAAGCCATCCTTCCCATACTGGTTTTAC11.8181818181818181No Hit
CGACAAAGGAGGCTGCTCAACTTCTTGATTTAAGCCCACGTCAAGTTTTC11.8181818181818181No Hit
ACCCGGTGCTCGGCCGAGACCGAGATCAATCCGTCCCGGGTACAGGGATT11.8181818181818181No Hit
GTTGAAGAAAGCGCTCAGTCTAATGGGGATTAAATTTGCGGAGACCTATG11.8181818181818181No Hit
ACTTTGTCGTCAAGCGTGCCGACGGCATTATGAGTTATCAACTTGCTGTC11.8181818181818181No Hit
GGGTCCGCGGCGGATCGCTGTGTTGCTGGTCGTCGCCGCGTTCGTGTACG11.8181818181818181No Hit
ACGTCTACCGTGATGTGCTGAACGTTCTCTGCCTCAAGGAGAAGATCGGC11.8181818181818181No Hit
AATCAATGATTATCCCATTCTTATCCGGGTCCGGCTTCGGCTTACCGCTG11.8181818181818181No Hit
GGGTACGAAAGAAACCCGATGGTGGCTTCACCGGGAGAGTTCAGTGTGCG11.8181818181818181No Hit
GTGAAACGGGACGACAGAAGGAAGAAGGACAATGGGCGACCGTAGTGACG11.8181818181818181No Hit
GAAATATGTTGCCTGACATGGATGAATAGACAAACGGCAGCCACTCATCT11.8181818181818181No Hit
GCCCATGGCTGATCAACGGAGACAACAAATTACCATGAAAAAACTTCACC11.8181818181818181No Hit
ACCTAAGAAAGTCAGACGCGTTTTTATTCCTAAACCAAATGGCAAAGAAA11.8181818181818181No Hit
CAACGACGTCATGGGCCTGGCCGTGGAGTCCGCCAAGATCGCGCTGTTGC11.8181818181818181No Hit
GTCTTTGTTCGCTTCTTGATTTCCTTCATCGTCCGCTCAATGATGTTGGT11.8181818181818181No Hit
ATCCAGAACCGGTTTCGATTAAGGCCTTAAGTGAAAGGATGTCCGTGACC11.8181818181818181No Hit
GCAATGGCGGCGACAGCGGAAATGCAGGCGGGGGTAACAGCGGTGGAAAC11.8181818181818181No Hit
TTCTGATCTTGCCAACGACGCAACCGGCCTGGTAAAGGTATACGGTAAAA11.8181818181818181No Hit
TCCCTGTACCGGTTGATATTGGGCTCTTTTCTGTTTCATACGAGTCCCTC11.8181818181818181No Hit
GGTTTCTTCACCGTATGAAATCATGACAACCGATACGCCTGTTCGTTCTT11.8181818181818181No Hit
GATGAGCCCTTACCACCCGAGGCCGAAAATGTCCAAACCATGCCAGACGG11.8181818181818181No Hit
GCTCTCAGAGGCCACCCATTTAATAACTATATCCGTGTCAAAGGCATAAC11.8181818181818181No Hit
GGACATGGTTCATGCCATTTTACATGACAACCAGGATGAAGACAGCGAAA11.8181818181818181No Hit
CCCCTGAGAAGATGACGCAGCATTCTTGTGGCCAATCCTTGTCCGCGTTC11.8181818181818181No Hit
GAATACAGGCGGTCGCCGCAGACACAACCTGCTTCGGGGATACGTCCATA11.8181818181818181No Hit
ATGTGGAGATTCCCCGTGACAAGCTGATTGTACTGACCGGGATTTCCGGT11.8181818181818181No Hit
ACGTCTACCGTGATGTGCAGAACGTTCTCTGCCTCAAGGAGAAGATCGGC11.8181818181818181No Hit
GCTTTACCTTCTGGCCGACGAACCCGGCGTATATAAAGGCCGCAATTCCA11.8181818181818181No Hit
GTGTGATCGTTGTGCTGCATGATATCACTGAACAGGAACAAATCGAAGAA11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)