FastQCFastQC Report
Tue 10 May 2022
EGAF00003661298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1079175
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCCACACAGTGCAAAATTGCCAGGGCTTCTGCCAGGTTCAGCAGCAGG15790.14631547246739407No Hit
CCTTATACCAGCGTTATGAGATCAAGATGACCAAGATGTATAAAGGGTTC13050.12092570713739663No Hit
GTATAAAGGGTTCCAAGCCTTAGGGGATGCCGCTGACATCCGGTTCGTCT12990.12036972687469595No Hit
GCCCTGGCTCCCGAGGCAGGCAGGCAAGGTGACGGGACTGGAAGCCCTTT12390.11480992424768921No Hit
GGGTGGACACTGTGCAGGCTTCAGCTTCCACTCCGGGCAGGATTCAGGCT11760.10897213148933213No Hit
ATCTGGGACCGCAGGGACTGCCAGGTGCACAGCCCTGGCTCCCGAGGCAG11350.10517293302754419No Hit
GTGCAGGCTTCAGCTTCCACTCCGGGCAGGATTCAGGCTATCTGGGACCG11100.10285634859962471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)