FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length146
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCTTCTTAACTCATTTTATGAGGCCAGCAGCATCCTGATACCAAAG44.597701149425287No Hit
GTTGGCTCCAAAGGCCTGTAGCGTTGTTCTAATACTTCGGTGATATCTCG22.2988505747126435No Hit
ATCTTCTGCAACGCTTTCTTCTTCTAATTCTTCTACTGGGTATATTGGCC22.2988505747126435No Hit
CCTTATTATTTCTTCTTCATTTCTTTTTTGAGATGGAGTCTTCCTCTGCT22.2988505747126435No Hit
GTTCCAACCCTCAGTTCCGACTCTGGAGAACCTCTTCCTCCTTCCAGCCG22.2988505747126435No Hit
GAAGATAACCATGTAGAGAGGTCCCCCAACCATGGCCTCATCCACCATCA22.2988505747126435No Hit
GTACATGGGTGACAAAATAATCCGTATGACAAACCCCTGTGATAGGAGTT22.2988505747126435No Hit
GCCTCAGCCTCCTGCGTAGCTGGGATTACAGGCAGGTGCCACCACGCCCG22.2988505747126435No Hit
GTGTAGAGGGAAGTATGGCAGAGAGAGGTGCTCATGTTTTCTCTTGTGGG22.2988505747126435No Hit
ATTTTCCAAATTTTATGCTCTGCTTCCCTTTTAAATGTAAATTCCAATTC22.2988505747126435No Hit
ATACAGGGGAGCAGGTGGCTGTTAAATCTCTGAAGCCTGAGAGTGGAGGT11.1494252873563218No Hit
GTTATATACTTATATTCTTAGTGGTCACTATGTAATTAACTACATAATAA11.1494252873563218No Hit
CCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTC11.1494252873563218No Hit
GGTGTTGGCGCTCGGGTCTTCCCCGGCCGGGTCGGCGGTGCTGGAAATCT11.1494252873563218No Hit
CTTCAGCCTGGAGGAGCTCAGGGTGGCCGGCATTCACAAGAAGGTGGCCC11.1494252873563218No Hit
GGCTGGAGTGCAGTGGCACAACCTCGGCGCACTGCCACCTCCGCCTCCCG11.1494252873563218No Hit
GGATATGCATATGCCTGTTGGTTCATACCATTGTGCATATTTGGAACATT11.1494252873563218No Hit
CCTTCTACATCATCGAGCGCGAGCCGCTCATCAACACCTACATCTCCGTG11.1494252873563218No Hit
GCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAAC11.1494252873563218No Hit
GTCGGATTCCGGGGACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGG11.1494252873563218No Hit
GTACATTGGCACTTGGGCTATTTTTTAGACTGGTTTAGATACGTAGTATG11.1494252873563218No Hit
CCAAGACGCAAAATGTCTGTCCAGTGCCCAGAGATGTGGTATGGTGTATT11.1494252873563218No Hit
GGCATATTCACTTGCAGCATCCAGCGATGTGTTGGTATGAAGAGACTGAT11.1494252873563218No Hit
GTATTTCTGGTTCTAGATCCCTTGAGGAATCGCCACACTGACTTCCACAA11.1494252873563218No Hit
TGTTCAGAGTCATTGTCAGCATTTGCTTCATTCAATTAAGTAATATCATA11.1494252873563218No Hit
GTACTCCCGATTGAAGCCCCCATTCGTATAATAATTACATCACAAGACGT11.1494252873563218No Hit
GTGCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCGGCT11.1494252873563218No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT11.1494252873563218No Hit
GTATTTATCTATTTTCTAAATAAACTCCTCCGGGTCATGTGCTTTTTGAA11.1494252873563218No Hit
GGTGTGGTGACTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGG11.1494252873563218No Hit
CCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAG11.1494252873563218No Hit
GCTGTACTCCCATGTTCACAATAGTCAAAATTTGGAAGCAACCTAATAAG11.1494252873563218No Hit
CCCCACACATGGGCAAGGACAGGTGGAATGTCGGGACCACACTGTGCGGC11.1494252873563218No Hit
AGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCA11.1494252873563218No Hit
GATCACACTACTGCAACCGCCACCTCCTGGGTTCAAGCGATTCTCCTGCC11.1494252873563218No Hit
ATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCAC11.1494252873563218No Hit
GCATTGAAACCATAAGCCGGCAAGTCTCCAGGTTAAAAGGTTTGTATCCT11.1494252873563218No Hit
CAAATGGAATCATTGAATGGATTCGAATGGAATCTTCATCATATGTAAAC11.1494252873563218No Hit
ACTATGACGTGGAGATCCGCCTCTCCCATGAGCACCAAGCCTACCGCTGG11.1494252873563218No Hit
GGTGTAGCTATTCTTATTTCTGGCAAAACAGACTTTTGATCAACAACAGT11.1494252873563218No Hit
GCAGAGATACAACAAAAAAACTTCAGGCCAATATTCTTGATGAACATCAA11.1494252873563218No Hit
GCTAAGATATGCTGCCTCCTTGATAAGATATGTGGTTTCAAGCAACAGTT11.1494252873563218No Hit
GAAGTAGATCTCCCGATTTCCTACTTAACTGCAGTCTCATCTTTGATTGT11.1494252873563218No Hit
CCCACCCTGGGCTGGGCAGCAAGAGGTCTGCTCACCTACTGCACCAGACT11.1494252873563218No Hit
CCATGGACTCCGTGCGCTCGGGGCCCTTCGGGCAGATCTTCCGGCCGGAC11.1494252873563218No Hit
TCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCAGGGGCAAA11.1494252873563218No Hit
AAACAAGAGAGTTGGAATTCATCTGTAAAAATCACTACATGTAACGTAGG11.1494252873563218No Hit
GATGCGTCGTGGAAGTTGATGGTCATGAACATACAGTGTGATAACCTATC11.1494252873563218No Hit
GGCTGGAGTGCAGTGGCACAACCTCGGCTCACTGCCACCTCCGCCTCCCG11.1494252873563218No Hit
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG11.1494252873563218No Hit
AGCAATCTACTAAAAAAGTACAACTGTATTTGAAGATAAATGCAGAGGTC11.1494252873563218No Hit
GAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTT11.1494252873563218No Hit
ATCAACATGAAACGGAATCAAACAGTATTATCGAATGTAATCGAAGAGGA11.1494252873563218No Hit
ACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCT11.1494252873563218No Hit
AATATTGGCTTTGATTTATGAATTAGACAAGTTGAATTTGGTTTGTAAAT11.1494252873563218No Hit
ACATCGTATTACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAA11.1494252873563218No Hit
GGATCAGCAGGTCCACAAAATTCTCGAAATGTCTTTGTAGCATTATTCTG11.1494252873563218No Hit
CTTCAAAGCCCTGCATGATCTGATTTCTTTTCTACTTCTCTGAATGCTTT11.1494252873563218No Hit
GCTCCAGAGAGTCTGTTATTCTGGCTGGTTTTGTTTGTTTCTGTGAAGTT11.1494252873563218No Hit
GATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTC11.1494252873563218No Hit
GTTTAAAGGATGCCATTCTACTAGATTATTATGGATCTGGATTTTTGTGG11.1494252873563218No Hit
GCTTATGGAAAACTCTATCGGGGGCCTACAAGAGTCCCACCAAGATGGGG11.1494252873563218No Hit
GGCTGGTAGCTCATTTGAGTAATGAGGTAAACTGTAGTTTGGCTAGAGAC11.1494252873563218No Hit
GCTTTAAGGCTTTGGAGAGAAAACAGATTAATATTAAATTACTTGTCTCA11.1494252873563218No Hit
AGTTAAGACCGTAGCATCAAAGCTAGATGGAGAAAGAAATGAAGATAGGA11.1494252873563218No Hit
CCCAAGGATCTGGTCAGACATGGTCTGAAATTTATCTTTCATCTGCTGCA11.1494252873563218No Hit
CCTATGCAGAAGTCCATAAACCAGACGAGGAAAGTATGGAGAAAAATTGT11.1494252873563218No Hit
AGCTACAACACAGGATAACCTTGATGATAAGCTAAGGAAGTTTGAAATTC11.1494252873563218No Hit
CCTATGCAGAAGTCCATAAACCAGAAGAGGAAAGTATGGAGAAAAATTGT11.1494252873563218No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACGTTTT11.1494252873563218No Hit
TAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGAATTGCGTTAGAT11.1494252873563218No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG11.1494252873563218No Hit
ATATATATCTATGCCAGAGGGGTGTCTTTTATAAAAATTCTTCTTCATTG11.1494252873563218No Hit
TCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTGGGCAACCAGGGGCAAA11.1494252873563218No Hit
TACTGTGGCCCCTCAGAATGATATTTGGCCTCACGGGAGGACATAGCCTA11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)