FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003661458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003661458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTATTTATGATCTGCATTCCCCTTTCAGTATCCAGTCTAGCTTAATGA33.4090909090909087No Hit
GGTGGCTGCTTTTAGGCCTACTATGGGTGTTAAATTTTTTACTCTCTCTA33.4090909090909087No Hit
GCACATGGGCGGCCAGGAGTACCCCTTCGAGACCTACTTCACTCGAGCCC33.4090909090909087No Hit
CTTTAGGCATGTTATCGTTTAAATCCTCACCACAACCTTGCAAAACATGC22.272727272727273No Hit
CAAGGGATCCTCCTGCCTCTGTCTCCCAAAGCACTGGAATTACAGGCATG22.272727272727273No Hit
ACGTGGAGGTGGAGGTCGACCGGCTCGAGCAGATCCCGGCGGTGCTCGCC22.272727272727273No Hit
CGGCTTGATTCCATTCCATTCCATTCCATTCAATTCCATTCCGTTCCATT22.272727272727273No Hit
CGCTTCTGCCCCGTACCTGTTGGCTGGCGAGACCATCGAAACCGCTCGCG22.272727272727273No Hit
CTTGAAAAGGTATTGCCAGAGTTGCAAAAGTATTTAAAGCTGTCTCTTAT22.272727272727273No Hit
AGCCAGAAGGCCGGCTACGACAAGCGCTACTACAGCGTGGATTTCGATCG22.272727272727273No Hit
GCGCTGATGCACCCGGGCCGAGATCACCCCACAGTCAGGGCAGGCCGCCT22.272727272727273No Hit
ATTTAATTCATTTGGCCCCAGTTTTCTATTCTTTTCTTTTTTTTGAGGCA11.1363636363636365No Hit
GGCTGGCCTTGCCGTCCACCCGGTTCCAGGGGACGAGGGCCATGATGACC11.1363636363636365No Hit
GCCTGAACCTGTTCGAGCGCGTTGTGGGTGCTGGCGCCGTCGGCCAACAA11.1363636363636365No Hit
GGGTTGAACCGGTAGGTCTTGCCCTCCTCGTAGGGGATCGCCTGGATGTA11.1363636363636365No Hit
GGGCACTGACGGCCTCAGATTTGGCTGAGCGACGACAGGGATATGTCACC11.1363636363636365No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC11.1363636363636365No Hit
CTCCGAGACCACGTCGCAGGTCGCCGCCCGGGTCGCCGCGGCCGCCGACC11.1363636363636365No Hit
TTTATAAGGAGAGGAAACACCCAATCTTGGAGAAGATGAAGAACAACCAC11.1363636363636365No Hit
CTTCTTCACCGTCGAGCCGTAGAAAAGCTCGATGACCTCGGCCTTGGACT11.1363636363636365No Hit
GGTAGGGAGAGGGGAGAGATATGAGAAACAGGAAGAAGGCAGAAGCCCAT11.1363636363636365No Hit
GCGGTGATCCGGGCGGCGGCTTCGTCGAGCAGCGCGGGGGCGATGCCCGC11.1363636363636365No Hit
CTGTAATTGGAATGAGTCCACTTTAAAACCTTTAACGAGGATCCATTGGA11.1363636363636365No Hit
GGCTTCGGGCGTGTGCCATTCGGATCTGTCCGTGGTGAACGGTCATCGCG11.1363636363636365No Hit
GCGCCAGACCTCCGGCTTCCACGGCCGCGCCGCGAGCCGCGAGGCTCCGC11.1363636363636365No Hit
GTCCAGGACCAACTTCTTCCGGGGCCGTAGATTCTAACACTATCATAGTG11.1363636363636365No Hit
GGGCAGGGTGATGTACGGGCTCGGGAGCCGGGCCGCGTCCCATTGCTCTC11.1363636363636365No Hit
AGCCGGCCCTTGCTGCGCACGAGCAGCGAGCCCTCGGTGCGCTCCACCTC11.1363636363636365No Hit
GTGGATTTAGCATCATTCTTCAGGATTCTTAAGATTTTGGGAATGGCAAA11.1363636363636365No Hit
CTGCTAGGAGATGTCTCCCAGTCAGGAGGCACGGGGGTCTGGGACCCACT11.1363636363636365No Hit
TTCCTAGGCAGCGGAGGGACATAAAATCTTTATTAGTGACAACAGCAGTG11.1363636363636365No Hit
GTAGCTGGGACTACAGGTGCCCGCCACCATGCCTGGTTAATTTTTGTGCT11.1363636363636365No Hit
GATATGGAGGATTCAGAGGAGATGTCGGGGGGGAGGGTGGCTTTATTCAG11.1363636363636365No Hit
CCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAG11.1363636363636365No Hit
CATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGTAGCAATT11.1363636363636365No Hit
ACGATGTTAAGTAATGGCCCCTGGATTCAGTCTGCAGCCTGAATTCTTAA11.1363636363636365No Hit
GGTGGCAGGGGTTAGGCCAAAGAGGGGTGTTAAATTTTTTACTATCTATA11.1363636363636365No Hit
GGTGTCGCGGTCCACGGCGGCCGCCGGCAGCAGCTCGATGCAGCCGGCAG11.1363636363636365No Hit
CTACGAGACCCCCGGCGGCACGATCCTGCTCGAGGCGCACCGCGGGATCG11.1363636363636365No Hit
GCTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAATGATC11.1363636363636365No Hit
ATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACTGC11.1363636363636365No Hit
CTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCA11.1363636363636365No Hit
CTTGTCAGAGGAGAAAAAGAAAATTTCTACGGTGGTGGCACACAGAATGG11.1363636363636365No Hit
GGGCGGGCCAGGTGCTCCTCGGCGCGAAGACTCTGGCCACCGGCGGGCTG11.1363636363636365No Hit
GTATGGAGCCTCACATCCATTTATAGCATGGTATATATGTCTGGGGCAAT11.1363636363636365No Hit
GTAGCATAATCACTTGTTCCTTAATTAGGGACCTGTATGAATGGCTCCAC11.1363636363636365No Hit
GGATCAGGACATCCCAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCA11.1363636363636365No Hit
ATTCCATTGCATTCTATTCCTTTCCATTCCATTCCATTCCATTCCGTTCC11.1363636363636365No Hit
GTCCCATGAAGTTGTAGTTCCACGAGGACTGGGCAGGGACCATGAAGAAG11.1363636363636365No Hit
TACTTGCGCAGGGCGAGCGGGGACTGGTCCCGCCAGCGGGCACGGAGCAG11.1363636363636365No Hit
CTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGA11.1363636363636365No Hit
CCACGAGGCCCCTCGGCTATCGCACTCCAGCGGGGGTCGAAGCGGCCTAC11.1363636363636365No Hit
CTGCTATTCAAGGGCAAGTATTTGGACCAGATTATCTTTCTGTCATTTCA11.1363636363636365No Hit
ATGTTAGACCCGCCGATGCGCGCCGGCCCTATGTCTTTCGCTTCAGAAAT11.1363636363636365No Hit
GCCACGGCCGCGGCCTCCGAACCAGCCACCGCGCTTGCCGCCGCCGTCGC11.1363636363636365No Hit
AAATAAATTAGCTGGGCGTGGCAGCGTGCGCCTGTTGTCCCAGCTACTCA11.1363636363636365No Hit
TCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTGATTTCTGCCCAGTGC11.1363636363636365No Hit
GTGGAATGGAATGGAATGGAATGGAATGGAATGGAATCAACTCGATTGGA11.1363636363636365No Hit
GCATTTCCCCAGTCAATTCCAGATCAAGCAATGAGACTTTTTCAAAGTTC11.1363636363636365No Hit
GTTGGTTCGCCGTCTGTTTGACGGTACTGGCTCTCCTGCGGCTGTCTCTT11.1363636363636365No Hit
GAAATTGACCAACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTAT11.1363636363636365No Hit
CGACCGCGACGTGCCCCCTGGTTCCGGTGTCGATGGCTGGCGCGCGCACC11.1363636363636365No Hit
ATCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCTTTCCTTT11.1363636363636365No Hit
GGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGAC11.1363636363636365No Hit
CATACACCCTCCCAACACTAAATCAGGAAGAAGTTAAATCCCTGAATAGA11.1363636363636365No Hit
GTTTAGTAAATCTTTTTCTTTCCTATGACAGCAAAAACGAGCTATGTAAC11.1363636363636365No Hit
CTGCTTGACCGCGACGAACTCCTCCTCGACCTGGCGGCGATATTCGTCGG11.1363636363636365No Hit
ATTCGAGACCATTCGATGATTGCATTCAATTCATTCGATGACGATTCCAT11.1363636363636365No Hit
CAGTAAAACAGGAGTTGCCTCCTTATAACGGTTTTGGACTAGTGGAAGAT11.1363636363636365No Hit
GTAGCTTGGATTACAGGTGCATGCTACCTCACCCAGCTAATTCTGTCTCT11.1363636363636365No Hit
TTTGGAGACTGCTAAATTTGCATTCTTGCATTGACACAAGCCTGTCTCTT11.1363636363636365No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA11.1363636363636365No Hit
ATTTAATTCATTTGGCCCCAGTTTTCTTTTCTTTTCTTTTTTTTGAGGCA11.1363636363636365No Hit
CCGTTGAGGGGTGCGTGGTGGTATTGCTGTTCGGGTGTGTTTTTGTGGGT11.1363636363636365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)